Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq426 116 4e-21 seq596 86.0 7e-12 >seq426 Length=67415 Score = 116 bits (128), Expect = 4e-21 Identities = 265/396 (67%), Gaps = 17/396 (4%) Strand=Plus/Minus Query 169139 GGCCAGAAGTAGTGAATCATATTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCG 169198 |||||| || ||| || | |||| | || || ||||| ||||||||||| | ||| Sbjct 24372 GGCCAGTTGTTGTGGATGAAGTTGATTAGCAGGCCTTTGATATGGGAACCGTCTTGATCC 24313 Query 169199 GCATCCGTCATGATCATGAGACGACCATACCGAAGC---------TCGGAAACATCTTGA 169249 ||| ||||||||||| || || || || ||| |||| | || Sbjct 24312 TGATCAGTCATGATCATCAGTTTTCCGTAGCGGAGCGTTTGCAAGTCGGCGGTAGTGAGA 24253 Query 169250 TAGTCCTTACCCTGT--TGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTTTG 169307 || | ||| | ||| || | ||||||||||| |||||| ||||| || |||| Sbjct 24252 TACTTCTT--CTTGTACTGCAACCCCAAGATCTTGATGAGATTGTTGATTTCAGCGTTTT 24195 Query 169308 ATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTACACTTCCCACGAAGAGGGAAGA 169367 || |||| || | ||| || ||||| || | ||| ||||| | ||||| | Sbjct 24194 CCAAGATCTGTTTGTGCGTGGCTTCACGAACGTTGAGAAGCTTACCACGCAATGGGAACA 24135 Query 169368 CACCGTAGTGATCACGACCAACGACGGAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGT 169427 | |||||||||||||| || || || ||| |||| || || | || ||| || |||| Sbjct 24134 CTCCGTAGTGATCACGTCCGACAACTCCGAGTCCCGAAACAGCCAAAGACTTGGCTGAGT 24075 Query 169428 CACCCTCGGTGACGATGAGCGTACATTT--TCCAGATTGTGCCGTACCCGCCTTGTTCGC 169485 | |||||||| | ||| | ||||| || || || | || ||||| || | ||| || Sbjct 24074 CTCCCTCGGTAAGGATCAATGTACAATTCATCGAGTTCTTG--GTACCGGCGTCGTTGGC 24017 Query 169486 ATCATCCAATTTGGGAATACCAGTAATTTTGGACTT 169521 || |||||||| ||||| || | | |||||||| Sbjct 24016 GTCTTCCAATTTTGGAATGCCCTTCAACTTGGACTT 23981 >seq596 Length=46163 Score = 86.0 bits (94), Expect = 7e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 94814 TCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGC 94873 |||| ||||| ||| || || || |||||| || ||| | | || | |||| Sbjct 2923 TCGCCTTTGCTGCTGTCGAAGGAATTTTCTTCAGCGGAAGCTTTGCCTCAATCTTCTGGC 2864 Query 94874 TCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACG 94933 |||||||||| ||| | |||||||||||| |||||| ||||| || ||||| ||||||| Sbjct 2863 TCAAGAAGCGCGGTTTGATGCCAGGTCTCACCTTCTCAAACGAACTCATCTCACGTGACG 2804 Query 94934 AGGGACTCCACCAAGAGTTTGC 94955 |||| | ||| || ||||| Sbjct 2803 AGGGCTTGCACTGTGACTTTGC 2782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583224368072280