Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2595 192 2e-43 seq108 154 4e-32 seq244 140 1e-27 seq1975 107 6e-18 seq444 102 2e-16 seq1542 87.8 5e-12 seq14 86.0 2e-11 seq1147 84.2 7e-11 >seq2595 Length=988 Score = 192 bits (212), Expect = 2e-43 Identities = 492/742 (66%), Gaps = 13/742 (2%) Strand=Plus/Plus Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 ||| |||| || | || || ||| ||||| ||| ||| |||||| | || ||| Sbjct 108 ATTCAGGTCGAGTTCAAGGGCGAAACAAAACGATTCGCACCGGAAGAAGTCAGCTCGATG 167 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 ||| | || |||| || | |||||||| ||| | ||||||| ||| || | || Sbjct 168 GTTCTGACCAAGATGAGAGAGACAGCTGAAGCTTATCTTGGTGAAAAAGTCACCAACGCA 227 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || || || || ||||| || || || || | |||||| || || ||||| || || Sbjct 228 GTCATCACAGTTCCAGCTTACTTCAACGACTCGCAGCGTCAGGCCACCAAAGACGCCGGA 287 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 |||||| || | || ||||| |||||||| || ||||| || ||||| || | || Sbjct 288 GCCATTGCCGGTCTGAACGTTCTGAGAATGATCAACGAACCGACGGCTGCTGCTTTGGCT 347 Query 349733 TATGGGCTTGATAAAA---TGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || | || || | ||| | | ||| ||| | || || || ||| | || Sbjct 348 TACGGTTTGGACAAGAACTTGAAGGGC---GAACGAAACGTGCTAATCTTCGATCTCGGC 404 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAA---TTTTTGAAGTTAAA 349846 ||||| || ||||| || || | | || | || || ||| | || ||||| ||| Sbjct 405 GGTGGCACATTTGACGTCTCTATCTTGACCATCGACGAAGGATCGTTGTTCGAAGTGAAA 464 Query 349847 GCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCAT 349906 |||| ||||| || || ||||| || |||||||| ||||| || ||| | || || Sbjct 465 TCAACGGCTGGCGACACTCATCTCGGCGGAGAAGACTTTGACAACCGTATGGTCAACCAC 524 Query 349907 TTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGA-GATAATCCTAGAGCAAT 349965 || | ||||||| ||||| |||| || | ||| | || || | || | Sbjct 525 TTCTTGGAAGAATTCAAGCG-CAAGTACAAGAAGGACTTGTCCGGCAACGCTCGCGCCCT 583 Query 349966 GCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAAC 350025 | | || | |||||||| || |||||||| ||||| | || ||||| || || || | Sbjct 584 GAGACGTTTGAGAACTGCATGCGAACGTGCAAAGCGAACTTTGTCATCGACAACTGAAGC 643 Query 350026 CTCTATTGAAATTGATTCTCTTGC-TGATGGCAAAGATTTCTTTTCATCTATTACACGTG 350084 | | ||||||||||| | |||| || ||| || |||| || ||| | || | Sbjct 644 CACAATTGAAATTGACGC-ATTGCACGAAGGCGTTGACTTCTACTCGAAGATTTCTCGCG 702 Query 350085 CTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAG 350144 |||| ||||||||| | ||||||||| || || | || ||||| || || ||||| | Sbjct 703 CTCGCTTTGAAGAACTCAATATGGATCTCTTCCGATCCACCATGGAACCAGTTGAAAAGG 762 Query 350145 TATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTT 350204 ||| || || || ||| |||| ||||| | || || || || || || || | Sbjct 763 CATTGCGCGACGCCAAGATGGACAAAGGCCAGATCCACGATGTTGTGTTGGTCGGCGGAT 822 Query 350205 CTACACGTATTCCAAAAGTTCA 350226 | | || || || ||||| || Sbjct 823 CCATTCGCATCCCGAAAGTGCA 844 >seq108 Length=162490 Score = 154 bits (170), Expect = 4e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | ||||| | ||||| || ||||| || ||||| || || || Sbjct 111834 ATACCACCACGAAGACGGAGAACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCG 111893 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 ||||| || || |||||||| || || ||||| ||||| ||||| |||||||| ||| Sbjct 111894 CTCAATGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGA 111953 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 ||||| ||||| || || || || || || || ||||| ||||| | || ||||| || Sbjct 111954 GGAATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCG 112013 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| ||||| || ||||| || || || ||||| Sbjct 112014 ACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 112063 >seq244 Length=102324 Score = 140 bits (154), Expect = 1e-27 Identities = 252/367 (69%), Gaps = 11/367 (3%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || ||||||||||| | |||||| | | ||||||||||||| ||||| |||||||| Sbjct 50434 CCAGAAGAAATTTCCGCCATGGTTCTCGGAAAAATGAAGGAAACCGCTGAGGCATATTTG 50493 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || | | || || | ||||| | ||||| |||||||| || ||||| ||||||||| Sbjct 50494 GGCAAGAAGGTCACCCACGCTGTCGTCACTGTTCCAGCCTACTTCAATGACGCCCAGCGT 50553 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || ||||| || ||| | || | || || | | || || || ||| Sbjct 50554 CAAGCTACCAAGGATGCCGGAGTCATCTCAGGCCTCAACGTCATGCGTATCATCAACGAA 50613 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATT 349771 || ||||| || || || || ||||| | || || || ||| |||||| || || Sbjct 50614 CCAACTGCCGCCGCTATCGCCTATGGATTGGACAA---GAAGGACGGAGAAAAGAACGTT 50670 Query 349772 CTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGA 349831 || | || ||| | || |||||||| || ||||| || || || || | || | ||| Sbjct 50671 CTCGTCTTCGATCTTGGCGGTGGTACCTTCGATGTCTCTCTGCTCACTATCGATAACGGA 50730 Query 349832 ATTTTTGAAGT----TAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 | || || || | || |||| ||||| || ||| | || || |||||||| || Sbjct 50731 GTCTTCGAGGTCGTCTCAACCAAC----GGTGACACCCATTTGGGAGGTGAAGATTTCGA 50786 Query 349888 TAATCGT 349894 | | ||| Sbjct 50787 TCAACGT 50793 Score = 105 bits (116), Expect = 2e-17 Identities = 165/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 350081 CGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAA 350140 ||||| |||||||||||| ||||||||||| || | || | | || || | Sbjct 50980 CGTGCCAAGTTTGAAGAATTGAACATGGATCTTTTCCGATCGACCCTCAAGCCCGTCCAG 51039 Query 350141 AAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGT 350200 ||||| || |||| || | ||| |||||| | | |||||| | ||| | || || Sbjct 51040 AAAGTCTTGGAAGACGCTGACATGAACAAAAAGGATGTCGATGAAATCGTTCTCGTCGGA 51099 Query 350201 GGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAA 350260 || || || ||||||||||| || ||||| ||| | || || || || || || ||| Sbjct 51100 GGATCCACTCGTATTCCAAAGGTCCAACAATTAGTCAAGGAATTCTTCAACGGAAAGGAA 51159 Query 350261 CCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316 || || ||| || || || ||||| || || || ||||| ||||||||||| || Sbjct 51160 CCATCAAGAGGCATCAACCCCGATGAGGCCGTCGCTTATGGCGCTGCTGTTCAAGC 51215 >seq1975 Length=2172 Score = 107 bits (118), Expect = 6e-18 Identities = 124/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 ||||| | || || || || ||||| || || || || || || || || |||||| Sbjct 2002 AGAACCAAGTGCAGTGTCGATTCTTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCT 2061 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || |||||||||||||| | || ||||| || || || |||||||| |||||| Sbjct 2062 TCGAGCTGCTTTCCAGCAAAGATCAATCGCTGCTGGTCTGGGGGGATTCCTTCCTTATCC 2121 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTC 140692 || || || || || || || ||||| || || ||||| || ||||| Sbjct 2122 TGGATCTTTGCCTTAACGTTCTCAATGGAGTCTGATGGCTCGACTTC 2168 >seq444 Length=64694 Score = 102 bits (112), Expect = 2e-16 Identities = 167/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 349771 TCTT-ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829 |||| || ||||| || || || ||||| || ||||| ||| | ||| | | |||| | Sbjct 63240 TCTTGATCTTTGACTTGGGAGGCGGTACGTTCGATGTCTCAATCCTATCGATCAAAGATG 63299 Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 |||| || || ||| | || || |||||||| || | || || || || ||||||| Sbjct 63300 GAATCTTCATGGTAAAATCGACAGCAGGTGATACTCACTTGGGAGGCGAGGACTTTGATA 63359 Query 349890 ATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCT-AAAATTGATATTGGA 349948 | || ||||| |||||||| ||||||| ||||| ||||| |||| ||| | || Sbjct 63360 ACCGCCTCGTGAGCCATTTTGTCGAAGAATTCAAGCG-CAAGCACAAAACGGATCT--GA 63416 Query 349949 GATAATCCTAGAG--CAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCG 350001 || | || | | | ||||| || ||||||||||| |||||||| ||||| Sbjct 63417 CATCCAACAAGCGATCTCTTCGTCGTCTTAGAACTGCGTGCGAACGTGCAAAGCG 63471 >seq1542 Length=4837 Score = 87.8 bits (96), Expect = 5e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 140613 CGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATC 140672 || ||||| || || || |||||||| || ||||| || || || || ||||| ||||| Sbjct 8 CGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATG 67 Query 140673 GAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATC 140732 || || || || ||||| || || || | ||||||||||| | ||| || || || || Sbjct 68 GAGTCGGAGGGCTCAACCTCGAGAGTGATGGTCTTTCCGGTCAATGTCTTGACGAAGATT 127 Query 140733 TGCATT 140738 |||||| Sbjct 128 TGCATT 133 >seq14 Length=334800 Score = 86.0 bits (94), Expect = 2e-11 Identities = 82/104 (79%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || ||||| | ||| |||||||| ||| || ||||| ||||| ||||| || ||||| Sbjct 183264 GTTGAAATCAATGCCAATGATCAGGGTTTTAGTACAACTCCATCTTACGTGGCTTTTACG 183205 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGC 349362 || ||||||| | ||||| ||||| ||||||||||| ||||| Sbjct 183204 GATTTTGAGCGTCT-ATTGGAGATTCCGCAAAAAATCAGGCTGC 183162 >seq1147 Length=13600 Score = 84.2 bits (92), Expect = 7e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 183681 TCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCG 183740 || ||||||||||| || ||||| || || || ||||| | || ||||| || ||||| Sbjct 7646 TCGAAATCTTCACCTCCCAAATGAGTGTCACCGGCAGTTGACTTGACTTCGAAAATTCCA 7587 Query 183741 TCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791 || || ||| || || || ||||| || |||||||| |||||||| ||| Sbjct 7586 TCATCGATAGACAAGATAGAGACATCGAAGGTACCACCGCCCAAATCGAAA 7536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515157387257591