Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1280 284 1e-71 >seq1280 Length=9399 Score = 284 bits (314), Expect = 1e-71 Identities = 1130/1759 (64%), Gaps = 57/1759 (3%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || |||||||||||||| || ||||| | ||| | ||||| |||| | ||| || | Sbjct 3233 GTGCGCAAATAGTACATTCCGGTCTTCAAGCCCATTTTCCAGCCGTGGAAGTGAATTGAC 3174 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCC-ATGAAGATGTTGAGCGACTGGGACTGGTCGAT 78308 | ||| || || | | || || | | | | ||||| ||||| ||||| ||||| Sbjct 3173 GTCAGTTTT-CCGTAGTTTGGCTCGGCGACGTGCACGTTGAATGACTGCGACTGATCGAT 3115 Query 78309 GTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGT 78368 | |||||||||| ||||| ||||| | ||| || ||| | |||||||||| ||| Sbjct 3114 GAACGCACCGCGATCGGCTGCCATCTGGATCTGCGTCTTGACTGACATCTCCCAGACGGT 3055 Query 78369 CCGGTAAAT-----GGCCTTCAGC-----TCTTCCTGGATGTCCAGCGCTTGTACGCTCC 78418 | ||| | || || || ||||| | ||||| | | || | || | | Sbjct 3054 CTTGTACAACTCGCGGATGTCGGCGGGGATCTTC-TCGATGTTCTGAACTGATCCGTTGC 2996 Query 78419 CACCGGCTCGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATC-TTCTGA-AG 78476 | || | || || ||||| || | || |||| ||| || ||| | || Sbjct 2995 TAGCG------ATGATCTCGTTCTTCATGTCGTCGTCCCAGAGATC--TCGTTCGGTGAG 2944 Query 78477 ATCCCGGACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTA 78536 |||| || || || | || | || || || ||| ||| || ||||| ||| Sbjct 2943 ATCCTTGATGAGATGGTGATTGACGATCTGAAATTCTCCGCTCAGCGTGCGGCGGTTGTA 2884 Query 78537 GATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGC 78596 || |||| | |||||||||||||| |||||||| || | ||||| || ||||| || Sbjct 2883 GACGTTGCTGGTGTACGGCTCGAAGCTTTCGTTGTTGCCGAGAATCTGTGCAGTCGAAGC 2824 Query 78597 GGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTT 78656 |||||||| || |||| || || ||||| || | || ||| ||||| |||| Sbjct 2823 AGTCGGCATTGGAGCGAGGAGAAGTGAATTGCGCACTCCGTGCTCGGCGATCTTAGCCTT 2764 Query 78657 TAGG------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGAT 78710 ||| | |||||| || | | | | | |||||||||| || | ||| Sbjct 2763 CAGGACAGCCCAGTCCCACAAGTTGGTTGGTGTCTTTTCCCACATGTCGTACTGCAAGAT 2704 Query 78711 ACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTC 78770 || | ||| ||||||| || | | | || ||||||| || ||| |||||||||| Sbjct 2703 TCCTTTCGACACCGGCGATCCTTCGTAGGTTTCGTAAGTACCGAGCTCTCTGGCGAGTTC 2644 Query 78771 GCA---TGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTC 78827 || || ||| ||| || ||| ||| | | ||||||||| || ||| |||| Sbjct 2643 ACAACTTGCCTCAAGC---GCGCCGTAGTAGATCGTCTCGAAGATCTGCTGGTTCAGCTT 2587 Query 78828 GCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTG 78887 | || || | | ||||||| | | | | | ||||| | ||||||||||| || Sbjct 2586 CTGTGCGTTTGGCGACTCGAACGGATAACTCATCGTGATGAAAGCGTCGGCCAGGCCTTG 2527 Query 78888 GACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTC---GGTCGG 78944 | ||||||| ||||||| || || ||||||| || ||| ||||| | |||| Sbjct 2526 AATGCCGATACCGATCGGGCGATGACGCATGT---TCGATCGCTTAGCCTCTGGGATCGG 2470 Query 78945 GTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTA 79004 ||| |||| |||||||| ||||| ||| ||||| | || || || | Sbjct 2469 GTAGTAGTTGACATCGATGATCTTGTTCAAGTTCTTTGTGACAGTCTTGGTGACTTCCTT 2410 Query 79005 CAATTTGGCGAAATCAAAATGATTTCCTTTGATG------AAAGTCGGTAGGCA--CAGC 79056 | || ||| || || || | ||||| || || | || | | Sbjct 2409 GAGCTTTTGGAAGTCGTAAGTCTTGGC--TGATGCGTTCACAAACATGTTGACAGCGATC 2352 Query 79057 GATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCAC 79116 |||||||| ||||| ||||| |||||| ||| ||| |||||||||||| |||||| Sbjct 2351 GATGCCAGATTGCAGACGGCGACTTCGTCCTTGCTGGAATACTCGATGATTTCCGTGCAC 2292 Query 79117 AAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCC 79176 || || || | |||||||||| ||||| |||||| ||| ||| || |||||| Sbjct 2291 AAGTTGGAGCAACGAATGGTGCCGACGTTCTGCTGGTTCGACTTTCGGTTGCAAGCGTCC 2232 Query 79177 TTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATG 79236 ||||| ||||||| ||||| || ||||| || || || || | | | ||| | | Sbjct 2231 TTGTACAACATGTAAGGCGTGCCAGTCTCGACTTGTGACTCGATGATGGCAAACCACAAG 2172 Query 79237 TCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCG 79296 || | ||| || ||| || || | || |||| || |||||||| Sbjct 2171 TCTTGAGCCTTGATCTGGCGGAGGTAACGGCCTTCGGCTTCGTATCTCTCGTACAACTTC 2112 Query 79297 TTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGC 79356 | ||| | || || | ||| ||||| || || |||||| ||||||| | Sbjct 2111 TCGAACTCTTCGCCCCACGAGTCGTAGAGGCCTGGACAGCTGTGCGGACACATCAACGAC 2052 Query 79357 CAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAG 79416 ||| | ||| | ||||| |||||| | || || ||||||| || ||| Sbjct 2051 CAGACTCCGTTGCTTTCAACGCGACGCATGAACAAATCGGGAATCCACAAAGCGTAGAAC 1992 Query 79417 AGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATG 79476 | ||| || ||| | || || | ||| ||| || ||||| || || | | Sbjct 1991 ATGTCACGAGCACGAACTTCTTCTTTGCCAGTGTTTTTCTTGAGATCGAGGAACTCGAAG 1932 Query 79477 ATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCC 79536 | |||| ||||||||||||| ||||| || ||||| | ||| |||||| ||||| Sbjct 1931 ACGTCGCCGTGCCACGGCTCGAGATAAATTGCGAAAGCACCTGGTCGCTTGTTTCCGCCT 1872 Query 79537 TGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCG 79596 |||| || || || || ||||||||| |||| || | ||| || || | |||| | | Sbjct 1871 TGGTCTACATAGCGAGCGGTGTTGTTGTAAACACGCAACATTGGAACAAGTCCGTTTGAG 1812 Query 79597 ACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCC 79655 | ||||| || ||| ||| || || | || ||||| | ||| || || || Sbjct 1811 ATCCCGTTGGTGCCGGCGATATACGTTCCCTTGGCGCGAAT-ACAGTGCACGTTGACACC 1753 Query 79656 GATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTC 79715 ||| || || | | ||||| ||| ||||| | || ||||| ||||| ||||| || Sbjct 1752 GATACCGCCAGCCGACTTGCTGATCAAAGCGCATTGTTTCAGCGTATCGTAAATGCCGTC 1693 Query 79716 GATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACC 79775 || ||||| || ||| | | || ||| || ||| | ||| ||| |||| | Sbjct 1692 AATTGAGTCATCGGACATCGACAACAAGAAACACGACGAAAGCTGCGGGCGAGGCGTAGC 1633 Query 79776 GGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGT 79835 |||| |||||| || |||| || || |||||| | || || || | ||| || Sbjct 1632 GGCGGCGAAGAGAGTTGGCGAGGCATGGGTGAAGTAGCGTTCAGACAAAAGGTTGTAAGT 1573 Query 79836 CTCCTTGACGCGCG-GGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGT 79894 ||| || | || | || ||| || || |||||||| || || || | ||||| | || Sbjct 1572 CTCAATGGC-CGAGTCGATGTCTTCACCATGGATGCCCACGGCAACTCTCATGAGCATGT 1514 Query 79895 ACTG-GGGCGTCTCGCCGA 79912 || ||||| |||| ||| Sbjct 1513 GTTGCGGGCG-CTCGGCGA 1496 Score = 273 bits (302), Expect = 2e-68 Identities = 1118/1737 (64%), Gaps = 59/1737 (3%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGC----GAGACA 19171 ||||| |||| || || ||||||||||| || ||| | ||| || || ||||| Sbjct 1520 TCATGAGAGTTGCCGTGGGCATCCATGGTGAAGACAT----CGACTCGGCCATTGAGACT 1575 Query 19172 TACGACCTGATGAGCCAGAA--GTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCG 19229 ||| |||| | | | ||| | |||||| || || |||| || || ||| ||||| Sbjct 1576 TACAACCT--TTTGTCTGAACGCTACTTCACCCATGCCTCGCCAACTCTCTTCGCCGCCG 1633 Query 19230 GTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTG 19289 |||| ||||||| | ||| |||||| | || | ||| |||||| |||| Sbjct 1634 CTACGCCTCGCCCGCAGCTTTCGTCGTGTTTCTTGTTGTCGATGTCCGATGACTCAATTG 1693 Query 19290 AGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCG 19349 | ||||| ||||| ||||| || | ||||| ||| ||||| | | || ||||||| Sbjct 1694 ACGGCATTTACGATACGCTGAAACAATGCGCTTTGATCAGCAAGTCGGCTGGCGGTATCG 1753 Query 19350 GGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTA 19408 | || || ||| | ||| || | | || || ||| || || ||||| | Sbjct 1754 GTGTCAACGTGCAC-TGTATTCGCGCCAAGGGAACGTATATCGCCGGCACCAACGGGATC 1812 Query 19409 GCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAG 19468 | |||| | || |||||| | || || | ||||||||| || | || || |||| Sbjct 1813 TCAAACGGACTTGTTCCAATGTTGCGTGTTTACAACAACACCGCTCGCTATGTAGACCAA 1872 Query 19469 GGGGGCGGCAAACG--CAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACG 19526 || || ||| || || | ||| ||||| || || |||||||| ||||||| |||| Sbjct 1873 GGCGGAAACAAGCGACCAGGTGCT--TTCGCAATTTATCTCGAGCCGTGGCACGGCGACG 1930 Query 19527 TCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACC 19586 || | || |||||||| || ||| || | || || | || ||| ||| Sbjct 1931 TCTTCGAGTTCCTCGATCTCAAGAAAAACACTGGCAAAGAAGAAGTTCGTGCTCGTGACA 1990 Query 19587 TCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAAT 19646 | ||| || ||||||||||| || | |||||| ||||| | ||| || | Sbjct 1991 TGTTCTACGCTTTGTGGATTCCCGATTTGTTCATGCGTCGCGTTGAAAGCAACGGAGTCT 2050 Query 19647 GGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCA 19706 || ||||||| |||||| || || ||||| |||| | ||||| | |||| Sbjct 2051 GGTCGTTGATGTGTCCGCACAGCTGTCCAGGCCTCTACGACTCGTGGGGCGAAGAGTTCG 2110 Query 19707 ATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGG 19766 | |||||||| || |||| |||| | ||||| | | | || ||| | | Sbjct 2111 AGAAGTTGTACGAGAGATACGAAGCCGAAGGCCGTTACCTCCGCCAGATCAAGGCTCAAG 2170 Query 19767 ACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACA 19826 || | ||| | || || | || |||||||| ||||| || ||||||| |||| Sbjct 2171 ACTTGTGGTTTGCCATCATCGAGTCACAAGTCGAGACTGGCACGCCTTACATGTTGTACA 2230 Query 19827 AGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACC 19886 ||||||| ||| ||||| || ||| ||||| ||||| | || | |||||| Sbjct 2231 AGGACGCTTGCAACCGAAAGTCGAACCAGCAGAACGTCGGCACCATTCGTTGCTCCAACT 2290 Query 19887 TGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGT 19946 |||| || |||||||| ||| ||||| |||||| ||||| || |||||||| | Sbjct 2291 TGTGCACGGAAATCATCGAGTATTCCAGCAAGGACGAAGTCGCCGTCTGCAATCTGGCAT 2350 Query 19947 CCCTGTGCCTGCCGAC--TTTCGTCAAGGCCTCCTCC------TTCGACTTTGCCAAA-- 19996 | | ||| | || || || || || || || | |||||| ||||| Sbjct 2351 --CGATCGCTGTCAACATGTTTGTGAACGCATCAGCCAAGACTTACGACTT--CCAAAAG 2406 Query 19997 TTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTT 20056 | | || || ||| | ||||| || |||| |||||||| |||| Sbjct 2407 CTCAAGGAAGTCACCAAGACTGTCACAAAGAACTTGAACAAGATCATCGATGTCAACTAC 2466 Query 20057 TACCCGA---CCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGC 20113 ||||||| | ||||| ||| ||||| ||||| || || ||||||| |||||| Sbjct 2467 TACCCGATCCCAGAGGCTAAGCG---ATCGAACATGCGTCATCGCCCGATCGGTATCGGC 2523 Query 20114 GTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCG 20173 | || ||||||||||||| |||||| | | | | | ||||| || || || Sbjct 2524 ATTCAAGGCCTGGCCGACGCTTTCATCACGATGAGTTATCCGTTCGAGTCGCCAAACGCA 2583 Query 20174 CGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGC 20233 | |||| ||| || ||||||||| | | ||| ||| || || || | || Sbjct 2584 CAGAAGCTGAACCAGCAGATCTTCGAGACGATCTACTACGGCGCGCTTGAGGCAAGTTGT 2643 Query 20234 GAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGT 20293 |||||||||| |||| ||| | ||||| || | | | || ||||| | ||| | || Sbjct 2644 GAACTCGCCAGAGAGCTCGGTACTTACGAAACCTACGAAGGATCGCCGGTGTCGAAAGGA 2703 Query 20294 ATCCTCCAGCCGGACATGTGGG--GCGTCACTGAGAATGAGTTTTGGAGC------GCCC 20345 ||| | ||| |||||||||| | ||| | | | || ||| | | || Sbjct 2704 ATCTTGCAGTACGACATGTGGGAAAAGACACCAACCA--ACTTGTGGGACTGGGCTGTCC 2761 Query 20346 TCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGA 20405 | |||| | ||||| ||||| | ||||| || | ||| |||| || ||||||| Sbjct 2762 TGAAGGCTAAGATCGCCGAGCACGGAGTGCGCAATTCACTTCTCCTCGCTCCAATGCCGA 2821 Query 20406 CCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACA 20465 | || ||||| || ||||| | || |||||||| |||||||||||||| | |||| Sbjct 2822 CTGCTTCGACTGCACAGATTCTCGGCAACAACGAAAGCTTCGAGCCGTACACCAGCAACG 2881 Query 20466 TCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTCCGCG 20525 ||||| || || || ||| ||| || || || || || | || || || | Sbjct 2882 TCTACAACCGCCGCACGCTGAGCGGAGAATTTCAGATCGTCAATCACCATCTCATCAAGG 2941 Query 20526 A-CTTGCAGAA-GATCGATATGTGGTCGCCCAAAATTAAGAATGAAATTGTC-CGAGCCG 20582 | || | ||| || ||| | ||| | | || ||||| || || || | || | Sbjct 2942 ATCTCACCGAACGA--GATCTCTGGGACGACGACATGAAGAACGAGATCATCGCTAG-CA 2998 Query 20583 GCGGGAGCGTCCAG-GCAT--TGGATATCCCCCAGAACCTCAAGGACATTTACAGGACCG 20639 ||| || ||| ||| | | |||||| || || || | |||| ||||| Sbjct 2999 ACGGATCAGTTCAGAACATCGAGAAGATCCCCGCCGACATCCGCGAGTTGTACAAGACCG 3058 Query 20640 TATGGGAAATCCCACAGAAGA-GCATCATCGACATGGCGGCCGATCGCGGCGCCTACATC 20698 | ||||| || || |||| ||| ||| | ||||| ||||||||||| || | |||| Sbjct 3059 TCTGGGAGATGTCAGTCAAGACGCA-GATCCAGATGGCAGCCGATCGCGGTGCGTTCATC 3117 Query 20699 GACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCC 20758 || ||||| ||||| |||| || | | | | || | | | || |||| || Sbjct 3118 GATCAGTCGCAGTCATTCAACGTGCACGTCGCCGAGCCAAACTACGGAAAACTGACGTCA 3177 Query 20759 ATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGACC 20815 || || | |||||||| | | ||| | ||||| || ||||||||| |||| ||| Sbjct 3178 ATTCACTTCCACGGCTGGAAAATGGGCTTGAAGACCGGAATGTACTATTTGCGCACC 3234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548490537769680