Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq1280 178 1e-39
seq426 118 1e-21
>seq1280
Length=9399
Score = 178 bits (196), Expect = 1e-39
Identities = 505/759 (67%), Gaps = 14/759 (2%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTAC-ACGCGTGTCCGTGAGACGTAC 53251
||||| | || ||| |||| ||||| ||||| ||| | || || | | |||||| |||
Sbjct 1520 TCATGAGAGTTGCCGTGGGCATCCATGGTGAAGACATCGACTCG-GCCATTGAGACTTAC 1578
Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311
|| | || || ||||| || || ||| ||||||| || ||| ||| | ||||
Sbjct 1579 AACCTTTTGTCTGAACGCTACTTCACCCATGCCTCGCCAACTCTCTTCGCCGCCGCTACG 1638
Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371
|| ||| ||| | ||| || ||| || || ||||| |||||||| || ||||||
Sbjct 1639 CCTCGCCCGCAGCTTTCGTCGTGTTTCTTGTTGTCGATGTCCGATGACTCAATTGACGGC 1698
Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431
|| ||||| ||||| || | || || ||| ||||| | | || ||||||||| ||
Sbjct 1699 ATTTACGATACGCTGAAACAATGCGCTTTGATCAGCAAGTCGGCTGGCGGTATCGGTGTC 1758
Query 53432 CAC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489
|| ||| | | | | || || || || || ||| || || ||||| || |
Sbjct 1759 AACGTGCACTGTA--TTCGCGCCAAGGGAACGTATATCGCCGGCACCAACGGGATCTCAA 1816
Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549
| ||| | || || ||| | || || | ||||||||| || || || || |||| || |
Sbjct 1817 ACGGACTTGTTCCAATGTTGCGTGTTTACAACAACACCGCTCGCTATGTAGACCAAGGCG 1876
Query 53550 GTGGGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608
| ||||| | ||| | | ||||| || || |||||||||||||||| |||| | |
Sbjct 1877 GAAACAAGCGACCAGGTG-CTTTCGCAATTTATCTCGAGCCGTGGCACGGCGACGTCTTC 1935
Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCA-GGGTGACGAAGAGATGCGCTGC-CGTGACCTGT 53666
||||| ||||| || | || || || | ||||| | || ||| |||||| |||
Sbjct 1936 GAGTTCCTCGATCT-CAAGAAAAACACTGGCAAAGAAGAAGTTCG-TGCTCGTGACATGT 1993
Query 53667 T-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGG 53725
| ||| ||| |||||||||| || | ||||||| || || | ||| | |||
Sbjct 1994 TCTAC-GCTTTGTGGATTCCCGATTTGTTCATGCGTCGCGTTGAAAGCAACGGAGTCTGG 2052
Query 53726 TACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAAC 53785
| ||||||| ||| || || || |||||| | | | || || ||||| |
Sbjct 2053 TCGTTGATGTGTCCGCACAGCTGTCCAGGCCTCTACGACTCGTGGGGCGAAGAGTTCGAG 2112
Query 53786 GAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAG 53845
|| |||| || |||| || | ||||| ||| || ||||||| | ||
Sbjct 2113 AAGTTGTACGAGAGATACGAAGCCGAAGGCCGTTACCTCCGCCAGATCAAGGCTCAAGAC 2172
Query 53846 GTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAG 53905
| ||| ||| ||| || || || || ||||| || ||||| ||||||| ||||||
Sbjct 2173 TTGTGGTTTGCCATCATCGAGTCACAAGTCGAGACTGGCACGCCTTACATGTTGTACAAG 2232
Query 53906 GATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944
|| | |||| ||| |||||| ||||| |||||
Sbjct 2233 GACGCTTGCAACCGAAAGTCGAACCAGCAGAACGTCGGC 2271
Score = 96.9 bits (106), Expect = 4e-15
Identities = 301/453 (66%), Gaps = 21/453 (5%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
||||| || || ||| | || |||||||| || || ||||| || ||||| | ||||||
Sbjct 2791 CGCAATTCACTTCTCCTCGCTCCAATGCCGACTGCTTCGACTGCACAGATTCTCGGCAAC 2850
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCT-AGCAGGTGA 55602
||||| |||||||||||||| | |||| ||||| ||||| || || ||| || ||
Sbjct 2851 AACGAAAGCTTCGAGCCGTACACCAGCAACGTCTACAACCGCCGCACGCTGAGC-GGAGA 2909
Query 55603 GTTTGTCATGATCAACAAGCACCTCGTCAAGGACCT----GCAGAAGATCAACAAGTGGA 55658
||| || |||| | || ||| ||||||| || | | ||||| |||
Sbjct 2910 ATTTCAGATCGTCAATCACCATCTCATCAAGGATCTCACCGAACGAGATC----TCTGGG 2965
Query 55659 ACCCGCAGATCAAG-ACG-GAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGGAGA 55715
|| | || ||| ||| ||| || | | ||| || || || ||||| | ||||
Sbjct 2966 ACGACGACATGAAGAACGAGATCATCGCTAGCAAC---GGATCAGTTCAGAACATCGAGA 3022
Query 55716 --TTCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTC 55772
||| | || | || ||| | ||| ||| || |||||||| || |||| |
Sbjct 3023 AGATCCCCGCCGACATCCGCGAGTTGTACAAGACCGTCTGGGAGATGTCAGTCAAGACGC 3082
Query 55773 TGATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCT 55832
||| | ||| || ||||| ||||||| |||||| ||||| ||||| | ||| |
Sbjct 3083 AGATCCAGATGGCAGCCGATCGCGGTGCGTTCATCGATCAGTCGCAGTCATTCAACGTGC 3142
Query 55833 TCATGGAGAATCCTTCACT-GGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAG 55891
| | | | || ||| | || ||| || || ||||| |||| ||||| | |
Sbjct 3143 ACGTCGCCGAGCC-AAACTACGGAAAACTGACGTCAATTCACTTCCACGGCTGGAAAATG 3201
Query 55892 GGACTCAAGACGGGTATGTACTATCTGCGGACC 55924
|| | ||||| || ||||||||| |||| |||
Sbjct 3202 GGCTTGAAGACCGGAATGTACTATTTGCGCACC 3234
>seq426
Length=67415
Score = 118 bits (130), Expect = 1e-21
Identities = 207/298 (69%), Gaps = 4/298 (1%)
Strand=Plus/Minus
Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088
||||||||||| || | ||| || |||||||| || |||| | || || |||||
Sbjct 25107 GTGAAGATGTAACGAGGGCTAGCGCTGTCCTTGCCGCCAGCCAATCTTGTACCGAACTGA 25048
Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148
|| ||||| ||| | |||||| |||||| ||| ||| | || ||||| | ||| ||
Sbjct 25047 CCGTTGGGCTGGAGCAAGTTGAGATTGTTGCTGCCGACGTAGTTTTGAGCAAGATTGACG 24988
Query 152149 ATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCC 152208
|| || || |||| ||||||||||| || || || | | || |||| | ||
Sbjct 24987 ATTGTACCGCACAGAGATGCTTCACCGTGATGGTATGCTGACATTTCAGCGACCGAACCA 24928
Query 152209 GCCAACTGCGCCACCTTCATGTC-CG-TCGTCAGGTTCTTCTTGAGACAGGCGTAAATCA 152266
||||| || || ||||| | || || | ||| ||| ||| | |||| | | || |
Sbjct 24927 GCCAATTGTGCAACCTTGACTTCACGTTTGTC--GTTACGCTTTAAGCAGGTGAAGATAA 24870
Query 152267 CCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324
||||||||||| || || |||||||| || ||| ||||| ||||| || ||||
Sbjct 24869 CCTTGCGCTGGCCGGGCTTTAAACCGTCGACGACGCATGGAATGGAACGAATGTTGTC 24812
Score = 86.0 bits (94), Expect = 7e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 153832 AATTTTGAACTGAAAACGTTAGCCAACTTGGCACCGTAACCATTGCGACCGCCCGTCACG 153891
|| |||| |||||| | ||| || |||||| ||||| ||||||||||| || || ||
Sbjct 23217 AACTTTGTACTGAAGATGTTGCACAGCTTGGCTCCGTAGCCATTGCGACCACCTGTGACC 23158
Query 153892 CGTTGTTCCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGAT 153941
|| ||| |||||||||||||| || ||||||||||| || |||||
Sbjct 23157 TTTTCTTCGTCGTCGTTGTAGTTCGACGATGTCAAAAGGTGGCCGAAGAT 23108
Score = 86.0 bits (94), Expect = 7e-12
Identities = 199/298 (67%), Gaps = 4/298 (1%)
Strand=Plus/Minus
Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364
||||| |||||||||| ||| || |||||||| ||||| | | |||||||| ||
Sbjct 25107 GTGAAGATGTAACGAGGGCTAGCGCTGTCCTTGCCGCCAGCCAATCTTGTACCGAACTGA 25048
Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424
|| | |||| | | ||| || |||||| ||| || |||||||||| | |||||
Sbjct 25047 CCGTTGGGCTGGAGCAAGTTGAGATTGTTGCTGCCGACGTAGTTTTGAGCAAGATTGACG 24988
Query 117425 ATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCC 117484
|| ||||| || || ||||| || || || || | | || || || | ||
Sbjct 24987 ATTGTACCGCACAGAGATGCTTCACCGTGATGGTATGCTGACATTTCAGCGACCGAACCA 24928
Query 117485 GCCAGCTGAGCCACCTTCATGTCTGACGTCAG--GTTCTTCTTGAGGCAGGCATAAATCA 117542
|||| || || ||||| | || |||| | ||| ||| | ||||| | || |
Sbjct 24927 GCCAATTGTGCAACCTTGACTTC--ACGTTTGTCGTTACGCTTTAAGCAGGTGAAGATAA 24870
Query 117543 CCTTGCGCTGACTTGGCTTCAGACCATCCGCCACGTGAGGGATCGAACGCTTGATGTC 117600
|||||||||| | ||||| | ||| || | ||| || || ||||| || ||||
Sbjct 24869 CCTTGCGCTGGCCGGGCTTTAAACCGTCGACGACGCATGGAATGGAACGAATGTTGTC 24812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547181819520600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |