Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1280 219 5e-52 seq108 152 6e-32 seq29 147 2e-30 seq1542 116 4e-21 seq1975 104 3e-17 seq596 96.9 4e-15 seq426 96.9 4e-15 >seq1280 Length=9399 Score = 219 bits (242), Expect = 5e-52 Identities = 864/1327 (65%), Gaps = 64/1327 (5%) Strand=Plus/Minus Query 80540 CCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACG 80599 |||||||||||| ||||||||| || | |||| |||| || || || | || ||||| | Sbjct 2725 CCCACATGTCGTACTGCAAGATTCCTTTCGACACCGGCGATCCTTCGTAGGTTTCGTAAG 2666 Query 80600 GGCCCTCCGTCT-TGGCCAGCTCACACGACT--CCATAAGGGCCGCGTGATAAATGCACT 80656 || | ||| |||| || ||||| ||| || ||| || ||| || || || Sbjct 2665 TACCGAGC-TCTCTGGCGAGTTCACA--ACTTGCCTCAAGCGCGCCGTAGTAGATCGTCT 2609 Query 80657 CAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCA 80716 | |||| || ||||| | || | ||| ||||||| | | |||| | | Sbjct 2608 CGAAGATCTGCTGGTTCAGCTTCTGTGCGTTTGGCGACTCGAACGGATAACTCATCGTGA 2549 Query 80717 TGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATC 80776 |||| |||| |||||||| |||| |||||| |||||||||| || ||| ||||||||| Sbjct 2548 TGAAAGCGTCGGCCAGGCCTTGAATGCCGATACCGATCGGGCGATGACGCATGTTCGATC 2489 Query 80777 GCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAA 80836 ||| ||||| || || ||||| |||| |||||||| ||||| ||| ||| | Sbjct 2488 GCTTAGCCTCTGGGATCGGGTAGTAGTTGACATCGATGATCTTGTTCAAGTTCTTTGTGA 2429 Query 80837 CAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAA----TTGGTTCC--CCTTCACAA 80890 || | || || || | || || || |||||| | |||| | | ||||||| Sbjct 2428 CAGTCTTGGTGACTTCCTTGAGCTTTTGGAAGTCGTAAGTCTTGGCTGATGCGTTCACAA 2369 Query 80891 A--TGCCGGAAG-GCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCAT-CTGTA 80946 | || | || | || || ||||||||||| ||||| || || || | | ||| | Sbjct 2368 ACATGTTGACAGCGATC---GATGCCAGATTGCAGACGGCGACTTCGTC--CTTGCTGGA 2314 Query 80947 A-ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTT 81005 | |||||| ||||||||||||||| || || | ||| || || | ||| | |||||| Sbjct 2313 ATACTCGATGATTTCCGTGCACAAGTTGGAGCAACGAATGGTGCCGACGTTCTGCTGGTT 2254 Query 81006 TGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGA 81065 ||||| |||||||||||||||||| ||||||| || || || |||||||| ||||| Sbjct 2253 CGACTTTCGGTTGCAAGCGTCCTTGTACAACATGTAAGGCGTGCCAGTCTCGACTTGTGA 2194 Query 81066 CTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGA---ATTTGCCTTC 81122 || || |||||| ||| | || | |||||| | || ||||| | |||||| Sbjct 2193 CTCGATGATGGCAAACCACAAGTCTTGAGCCTTG---ATCTGGCGGAGGTAACGGCCTTC 2137 Query 81123 GGCCACATACTTGGCGTA-AGCTTCGTCGAA--CTTGGCACCGTGAAGTTCAGTGAGGTC 81179 ||| | || | |||| | |||| ||||| ||| || || || || |||| | Sbjct 2136 GGCTTCGTATCTCTCGTACAACTTC-TCGAACTCTTCGCCCCACGA--GTCGTAGAGGCC 2080 Query 81180 TGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAA 81239 ||| || || || ||||||| |||| | || | | || || |||||| Sbjct 2079 TGGACAGCTGTGCGGACACATCAACGACCAGACTCCGTTGCTTTCAACGCGACGCATGAA 2020 Query 81240 AGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCT 81298 || || ||||| | ||| ||||| ||| || ||| || | || || | || Sbjct 2019 CAAATCGGGAATCCACAAAGCGTAGAACATGTCACGAGCA-CGAACTTCTTCTTTGCCAG 1961 Query 81299 GGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGG 81358 ||| | ||||| || || | || ||| | ||||| ||||| ||||| | | Sbjct 1960 TGTTTTTCTTGAGATCGAGGAACTCGAAGACGTCGCCGTGCCACGGCTCGAGATAAATTG 1901 Query 81359 CGATCGACCCCTTG-CGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAAT 81414 ||| | | ||| | || | || || |||| || || || || || ||| | Sbjct 1900 CGAAAG-CACCTGGTCGCTTGTTTCCGCCTTGGTCTACATAGCGAGCGGTGTTGTTGTAA 1842 Query 81415 ACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCC 81474 ||||||||||| || | | || | ||| ||||| || || ||||| || ||| Sbjct 1841 ACACGCAACATTGGAACAAGTCCGTTTGAGATCCCGTTGGTGCCGGCGATATACGTTCCC 1782 Query 81475 TTGGCGCG--CACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAG 81532 |||||||| || ||| ||| | |||||| || || | | |||| ||| || Sbjct 1781 TTGGCGCGAATACAGTGCACGTTG--ACACCGATACCGCCAGCCGACTTGCTGATCAAAG 1724 Query 81533 CACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCAT-GTCAAGCAAG 81591 | || | |||| || || ||||| || || || || | ||| | ||| |||| Sbjct 1723 CGCATTGTTTCAGCGTATCGTAAATGCCGTCAATTGAGTCATCGGACATCGACAA-CAAG 1665 Query 81592 AAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGA 81651 ||||| || | ||| |||| | |||| ||| || ||||| | || || Sbjct 1664 AAACACGACGAAAGCTGCGGGCGAGGCGTAGCGGCGGCGAAGAGAGTTGGCGAGGCATGG 1605 Query 81652 ATGAAATAACGGTTTGACATCAGGTCATAGGTTTC-CTTGACGCGTGGAATATCGTCACC 81710 |||| || || | |||| |||| || || || | | || || | || || ||||| Sbjct 1604 GTGAAGTAGCGTTCAGACAAAAGGTTGTAAGTCTCAATGGCCGAGTCG-ATGTCTTCACC 1546 Query 81711 GTGAATACCGATAGCTACACGCATAAACATGTACTG-GGGCG--------TCTCGCCTGC 81761 || || || | || || | ||| | ||||| || ||||| ||| |||| Sbjct 1545 ATGGATGCCCACGGCAACTCTCATGAGCATGTGTTGCGGGCGCTCGGCGATCTTGCCTTT 1486 Query 81762 GTT------CAGGTACATCTTCTGCAAAGTCTTGATGCCGAAGTAACCGAACCCGTAGTC 81815 ||| || ||| | || ||||||||||| ||||||||| | | ||| |||| Sbjct 1485 GTTCTTCAGCAAGTAGCTGCGCTCCAAAGTCTTGAATCCGAAGTAATTGTAGCCGAAGTC 1426 Query 81816 GCGTTCG 81822 ||| ||| Sbjct 1425 GCGGTCG 1419 >seq108 Length=162490 Score = 152 bits (168), Expect = 6e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || || || || ||||||||||| || || || ||||| ||| || Sbjct 112063 ATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGCCATCG 112004 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||||| || || || |||||||| || ||||||||||| ||| Sbjct 112003 GACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCAGATCAG 111944 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || ||||| ||||| || || || | ||| || | ||| ||||| || Sbjct 111943 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAAGACGGTCGCACATTGAGC-GACTACAA 111885 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || ||||| | || | |||||||| ||||| Sbjct 111884 CATTCAGAAGGAGTCGACACTTCACTTGGTTCTCCGTCTTCGTGGTGG 111837 >seq29 Length=258594 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| ||||| || | || || || || ||||| || ||||||||| || Sbjct 96423 ATGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATTACCCTCGAGGTTGAGCCATCG 96482 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | |||| | ||||| || || |||||||| || || ||||| ||||||||| Sbjct 96483 GACACTATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGACCAG 96542 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| | || || || || |||||| | || |||| ||||| || ||| ||||| || Sbjct 96543 CAGCGATTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGTACTCTGAGC-GACTACAA 96601 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| || || ||||| | ||| | ||||| || ||||| Sbjct 96602 CATCCAAAAGGAGTCGACACTTCACTTGGTCCTCCGTCTGCGTGGTGG 96649 >seq1542 Length=4837 Score = 116 bits (128), Expect = 4e-21 Identities = 103/129 (80%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 27402 TATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTC 27461 || |||||||||||| |||||||| | ||||| ||||| || ||||| ||||||||| | Sbjct 136 TAGAATGCAAATCTTCGTCAAGACATTGACCGGAAAGACCATCACTCTCGAGGTTGAGCC 77 Query 27462 AGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521 || ||||| |||| | ||||| || || ||||||||||| ||||| || ||||| Sbjct 76 CTCCGACTCCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGAATCCCCCCAGA 17 Query 27522 CCAGCAGCG 27530 ||||||||| Sbjct 16 CCAGCAGCG 8 Score = 98.7 bits (108), Expect = 1e-15 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||||||||| || | || |||||||| || || || ||||||||| || Sbjct 4724 ATGCAAATCTTTGTCAAAACATTGACAGGCAAGACCATCACCCTCGAGGTTGAGCCATCA 4783 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCA 27519 || | ||| | ||| | |||||||| || ||||||||||| |||||||| ||| Sbjct 4784 GACACCATCGAAAACGTTAAGGCTAAGATCCAGGACAAGGAAGGAATTCCCCCA 4837 >seq1975 Length=2172 Score = 104 bits (114), Expect = 3e-17 Identities = 123/164 (75%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 27471 CATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCG 27530 ||||| || | ||||| || || ||||| ||||| ||||| || |||||||||||||| Sbjct 2148 CATTGAGAACGTTAAGGCAAAGATCCAGGATAAGGAAGGAATCCCCCCAGACCAGCAGCG 2089 Query 27531 TCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCC 27589 | || |||||||| ||||| ||||| |||| ||| ||| | ||| ||||| || ||| Sbjct 2088 ATTGATCTTTGCTGGAAAGCAGCTCGAAGATGGTCGCACCTTGAGC-GACTACAACATCC 2030 Query 27590 AAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || ||||| || || || | || | ||||| || || ||| Sbjct 2029 AGAAAGAATCGACACTGCACTTGGTTCTTCGTCTCCGTGGAGGA 1986 >seq596 Length=46163 Score = 96.9 bits (106), Expect = 4e-15 Identities = 294/443 (66%), Gaps = 16/443 (4%) Strand=Plus/Minus Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTA 64785 || ||||| ||| |||||||||||||| || || || || |||||||| Sbjct 2921 GCCTTTGCTGCTGTCGAAGGAATTTTCTTCAGCGGAAGCTTTGCCTCAATCTTCTGGCTC 2862 Query 64786 AAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAG 64845 || ||||| || ||||||||||||| | || || ||||| || ||||| || |||||| Sbjct 2861 AAGAAGCGCGGTTTGATGCCAGGTCTCACCTTCTCAAACGAACTCATCTCACGTGACGAG 2802 Query 64846 GGGCTCCACCAAGAATTTGCGGTTACC--CTGTTCAGCCACCTCAAGGACAAACCATCAC 64903 || | ||| || ||||| || || ||||||| || || | | || ||| || Sbjct 2801 GGCTTGCACTGTGACTTTGC--TTGCCTGATGTTCAGACATCTTGAACAGAAGCCACCA- 2745 Query 64904 ATGGGAC-TATAATTGATATAGTAAAATCGGCTGTAGAAATTGAAAAGGAATTCATTACT 64962 | || || | || || || | | ||||||| | |||||| | || || | || Sbjct 2744 AAGGAACGCGTTATCGAGATCATCTCAGAGGCTGTAAAGATTGAACAAGAGTTTCTGACC 2685 Query 64963 GCCGCGCTTCCGTGTCGTC-TCATCGGCATGGA-TGCCGATAAGATGAAACAGTATATCG 65020 | ||| |||||||| || | | |||||||| | ||| || | ||| | || |||| Sbjct 2684 GACGCCCTTCCGTG-CGACATGCTCGGCATGAACTGCGGACTA-ATGTCTGAATACATCG 2627 Query 65021 AATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGTATT---AAGCCCTACTGGAATTCTT 65077 | || || || ||||| || || | || |||| || ||| |||| ||| | Sbjct 2626 AGTTCGTGGCCGATCGTCTTCTGTCCGAGCTTGGAGTTGGAAAGATCTAC---AATACCA 2570 Query 65078 CAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTTGAAA 65137 |||||| || || ||||| ||||| || ||||| ||||| || || || || | Sbjct 2569 AAAATCCCTTCTCCTTCATGGAATCGATCTCGCTCGAGGGAAAGACGAATTTCTTCGAGA 2510 Query 65138 AGAGGGTAGGTGATTACTCAAAG 65160 ||| || || || ||| |||| Sbjct 2509 AGAAAGTGGGAGAATACCAAAAG 2487 >seq426 Length=67415 Score = 96.9 bits (106), Expect = 4e-15 Identities = 252/380 (66%), Gaps = 6/380 (2%) Strand=Plus/Plus Query 31963 CGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCC 32022 || ||||||||| ||| | ||||| | ||||| ||||||||||| || | | || Sbjct 24821 CGTTCCATTCCATGCGTCGTCGACGGTTTAAAGCCCGGCCAGCGCAAGGTTATCTTCACC 24880 Query 32023 TGCCTCAAGAAGAACCTGTCGA--GTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGG 32080 ||| | ||| ||| | | | |||| | ||||| || || || | || | || | Sbjct 24881 TGCTTAAAGCGTAAC--GACAAACGTGAAGTCAAGGTTGCACAATTGGCTGGTTCGGTCG 24938 Query 32081 CAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTG 32140 | || | || || || ||||| || || || || || || || ||||| |||| Sbjct 24939 CTGAAATGTCAGCATACCATCACGGTGAAGCATCTCTGTGCGGTACAATCGTCAATCTTG 24998 Query 32141 CTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGA 32200 |||| |||| ||||| || || || ||||| ||| |||| || ||||| || | Sbjct 24999 CTCAAAACTACGTCGGCAGCAACAATCTCAACTTGCTCCAGCCCAACGGTCAGTTCGGTA 25058 Query 32201 CCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCAC 32260 | | | || || |||||||| || ||| | ||||||||||||||| || ||| Sbjct 25059 CAAGATTGGCTGGCGGCAAGGACAGCGCTAGCCCTCGTTACATCTTCACCATGCTTTCAC 25118 Query 32261 C-TTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGAT 32319 | ||| | || |||||| ||||| |||||| | ||||||||| | ||| Sbjct 25119 CGCTCG-CTCGTCTTATTTTCCACCCGCACGACGATCCATTGCTCAAGTTCCTGGACGAT 25177 Query 32320 GACGGTCAGCGGGTCGAGCC 32339 ||| |||||| | ||||| Sbjct 25178 GACAATCAGCGCATTGAGCC 25197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570274776986640