Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq1280 219 5e-52
seq108 152 6e-32
seq29 147 2e-30
seq1542 116 4e-21
seq1975 104 3e-17
seq596 96.9 4e-15
seq426 96.9 4e-15
>seq1280
Length=9399
Score = 219 bits (242), Expect = 5e-52
Identities = 864/1327 (65%), Gaps = 64/1327 (5%)
Strand=Plus/Minus
Query 80540 CCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACG 80599
|||||||||||| ||||||||| || | |||| |||| || || || | || ||||| |
Sbjct 2725 CCCACATGTCGTACTGCAAGATTCCTTTCGACACCGGCGATCCTTCGTAGGTTTCGTAAG 2666
Query 80600 GGCCCTCCGTCT-TGGCCAGCTCACACGACT--CCATAAGGGCCGCGTGATAAATGCACT 80656
|| | ||| |||| || ||||| ||| || ||| || ||| || || ||
Sbjct 2665 TACCGAGC-TCTCTGGCGAGTTCACA--ACTTGCCTCAAGCGCGCCGTAGTAGATCGTCT 2609
Query 80657 CAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCA 80716
| |||| || ||||| | || | ||| ||||||| | | |||| | |
Sbjct 2608 CGAAGATCTGCTGGTTCAGCTTCTGTGCGTTTGGCGACTCGAACGGATAACTCATCGTGA 2549
Query 80717 TGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATC 80776
|||| |||| |||||||| |||| |||||| |||||||||| || ||| |||||||||
Sbjct 2548 TGAAAGCGTCGGCCAGGCCTTGAATGCCGATACCGATCGGGCGATGACGCATGTTCGATC 2489
Query 80777 GCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAA 80836
||| ||||| || || ||||| |||| |||||||| ||||| ||| ||| |
Sbjct 2488 GCTTAGCCTCTGGGATCGGGTAGTAGTTGACATCGATGATCTTGTTCAAGTTCTTTGTGA 2429
Query 80837 CAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAA----TTGGTTCC--CCTTCACAA 80890
|| | || || || | || || || |||||| | |||| | | |||||||
Sbjct 2428 CAGTCTTGGTGACTTCCTTGAGCTTTTGGAAGTCGTAAGTCTTGGCTGATGCGTTCACAA 2369
Query 80891 A--TGCCGGAAG-GCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCAT-CTGTA 80946
| || | || | || || ||||||||||| ||||| || || || | | ||| |
Sbjct 2368 ACATGTTGACAGCGATC---GATGCCAGATTGCAGACGGCGACTTCGTC--CTTGCTGGA 2314
Query 80947 A-ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTT 81005
| |||||| ||||||||||||||| || || | ||| || || | ||| | ||||||
Sbjct 2313 ATACTCGATGATTTCCGTGCACAAGTTGGAGCAACGAATGGTGCCGACGTTCTGCTGGTT 2254
Query 81006 TGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGA 81065
||||| |||||||||||||||||| ||||||| || || || |||||||| |||||
Sbjct 2253 CGACTTTCGGTTGCAAGCGTCCTTGTACAACATGTAAGGCGTGCCAGTCTCGACTTGTGA 2194
Query 81066 CTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGA---ATTTGCCTTC 81122
|| || |||||| ||| | || | |||||| | || ||||| | ||||||
Sbjct 2193 CTCGATGATGGCAAACCACAAGTCTTGAGCCTTG---ATCTGGCGGAGGTAACGGCCTTC 2137
Query 81123 GGCCACATACTTGGCGTA-AGCTTCGTCGAA--CTTGGCACCGTGAAGTTCAGTGAGGTC 81179
||| | || | |||| | |||| ||||| ||| || || || || |||| |
Sbjct 2136 GGCTTCGTATCTCTCGTACAACTTC-TCGAACTCTTCGCCCCACGA--GTCGTAGAGGCC 2080
Query 81180 TGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAA 81239
||| || || || ||||||| |||| | || | | || || ||||||
Sbjct 2079 TGGACAGCTGTGCGGACACATCAACGACCAGACTCCGTTGCTTTCAACGCGACGCATGAA 2020
Query 81240 AGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCT 81298
|| || ||||| | ||| ||||| ||| || ||| || | || || | ||
Sbjct 2019 CAAATCGGGAATCCACAAAGCGTAGAACATGTCACGAGCA-CGAACTTCTTCTTTGCCAG 1961
Query 81299 GGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGG 81358
||| | ||||| || || | || ||| | ||||| ||||| ||||| | |
Sbjct 1960 TGTTTTTCTTGAGATCGAGGAACTCGAAGACGTCGCCGTGCCACGGCTCGAGATAAATTG 1901
Query 81359 CGATCGACCCCTTG-CGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAAT 81414
||| | | ||| | || | || || |||| || || || || || ||| |
Sbjct 1900 CGAAAG-CACCTGGTCGCTTGTTTCCGCCTTGGTCTACATAGCGAGCGGTGTTGTTGTAA 1842
Query 81415 ACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCC 81474
||||||||||| || | | || | ||| ||||| || || ||||| || |||
Sbjct 1841 ACACGCAACATTGGAACAAGTCCGTTTGAGATCCCGTTGGTGCCGGCGATATACGTTCCC 1782
Query 81475 TTGGCGCG--CACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAG 81532
|||||||| || ||| ||| | |||||| || || | | |||| ||| ||
Sbjct 1781 TTGGCGCGAATACAGTGCACGTTG--ACACCGATACCGCCAGCCGACTTGCTGATCAAAG 1724
Query 81533 CACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCAT-GTCAAGCAAG 81591
| || | |||| || || ||||| || || || || | ||| | ||| ||||
Sbjct 1723 CGCATTGTTTCAGCGTATCGTAAATGCCGTCAATTGAGTCATCGGACATCGACAA-CAAG 1665
Query 81592 AAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGA 81651
||||| || | ||| |||| | |||| ||| || ||||| | || ||
Sbjct 1664 AAACACGACGAAAGCTGCGGGCGAGGCGTAGCGGCGGCGAAGAGAGTTGGCGAGGCATGG 1605
Query 81652 ATGAAATAACGGTTTGACATCAGGTCATAGGTTTC-CTTGACGCGTGGAATATCGTCACC 81710
|||| || || | |||| |||| || || || | | || || | || || |||||
Sbjct 1604 GTGAAGTAGCGTTCAGACAAAAGGTTGTAAGTCTCAATGGCCGAGTCG-ATGTCTTCACC 1546
Query 81711 GTGAATACCGATAGCTACACGCATAAACATGTACTG-GGGCG--------TCTCGCCTGC 81761
|| || || | || || | ||| | ||||| || ||||| ||| ||||
Sbjct 1545 ATGGATGCCCACGGCAACTCTCATGAGCATGTGTTGCGGGCGCTCGGCGATCTTGCCTTT 1486
Query 81762 GTT------CAGGTACATCTTCTGCAAAGTCTTGATGCCGAAGTAACCGAACCCGTAGTC 81815
||| || ||| | || ||||||||||| ||||||||| | | ||| ||||
Sbjct 1485 GTTCTTCAGCAAGTAGCTGCGCTCCAAAGTCTTGAATCCGAAGTAATTGTAGCCGAAGTC 1426
Query 81816 GCGTTCG 81822
||| |||
Sbjct 1425 GCGGTCG 1419
>seq108
Length=162490
Score = 152 bits (168), Expect = 6e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || || || || ||||||||||| || || || ||||| ||| ||
Sbjct 112063 ATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGCCATCG 112004
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| |||| | ||||| || || || |||||||| || ||||||||||| |||
Sbjct 112003 GACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCAGATCAG 111944
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
|||||||| || || ||||| ||||| || || || | ||| || | ||| ||||| ||
Sbjct 111943 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAAGACGGTCGCACATTGAGC-GACTACAA 111885
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| || || ||||| | || | |||||||| |||||
Sbjct 111884 CATTCAGAAGGAGTCGACACTTCACTTGGTTCTCCGTCTTCGTGGTGG 111837
>seq29
Length=258594
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| ||||| || | || || || || ||||| || ||||||||| ||
Sbjct 96423 ATGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATTACCCTCGAGGTTGAGCCATCG 96482
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | |||| | ||||| || || |||||||| || || ||||| |||||||||
Sbjct 96483 GACACTATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGACCAG 96542
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
||||| | || || || || |||||| | || |||| ||||| || ||| ||||| ||
Sbjct 96543 CAGCGATTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGTACTCTGAGC-GACTACAA 96601
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||| || || ||||| | ||| | ||||| || |||||
Sbjct 96602 CATCCAAAAGGAGTCGACACTTCACTTGGTCCTCCGTCTGCGTGGTGG 96649
>seq1542
Length=4837
Score = 116 bits (128), Expect = 4e-21
Identities = 103/129 (80%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 27402 TATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTC 27461
|| |||||||||||| |||||||| | ||||| ||||| || ||||| ||||||||| |
Sbjct 136 TAGAATGCAAATCTTCGTCAAGACATTGACCGGAAAGACCATCACTCTCGAGGTTGAGCC 77
Query 27462 AGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGA 27521
|| ||||| |||| | ||||| || || ||||||||||| ||||| || |||||
Sbjct 76 CTCCGACTCCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGAATCCCCCCAGA 17
Query 27522 CCAGCAGCG 27530
|||||||||
Sbjct 16 CCAGCAGCG 8
Score = 98.7 bits (108), Expect = 1e-15
Identities = 90/114 (79%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||||||||| || | || |||||||| || || || ||||||||| ||
Sbjct 4724 ATGCAAATCTTTGTCAAAACATTGACAGGCAAGACCATCACCCTCGAGGTTGAGCCATCA 4783
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCA 27519
|| | ||| | ||| | |||||||| || ||||||||||| |||||||| |||
Sbjct 4784 GACACCATCGAAAACGTTAAGGCTAAGATCCAGGACAAGGAAGGAATTCCCCCA 4837
>seq1975
Length=2172
Score = 104 bits (114), Expect = 3e-17
Identities = 123/164 (75%), Gaps = 2/164 (1%)
Strand=Plus/Minus
Query 27471 CATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCG 27530
||||| || | ||||| || || ||||| ||||| ||||| || ||||||||||||||
Sbjct 2148 CATTGAGAACGTTAAGGCAAAGATCCAGGATAAGGAAGGAATCCCCCCAGACCAGCAGCG 2089
Query 27531 TCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCC 27589
| || |||||||| ||||| ||||| |||| ||| ||| | ||| ||||| || |||
Sbjct 2088 ATTGATCTTTGCTGGAAAGCAGCTCGAAGATGGTCGCACCTTGAGC-GACTACAACATCC 2030
Query 27590 AAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
| || ||||| || || || | || | ||||| || || |||
Sbjct 2029 AGAAAGAATCGACACTGCACTTGGTTCTTCGTCTCCGTGGAGGA 1986
>seq596
Length=46163
Score = 96.9 bits (106), Expect = 4e-15
Identities = 294/443 (66%), Gaps = 16/443 (4%)
Strand=Plus/Minus
Query 64726 GCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTA 64785
|| ||||| ||| |||||||||||||| || || || || ||||||||
Sbjct 2921 GCCTTTGCTGCTGTCGAAGGAATTTTCTTCAGCGGAAGCTTTGCCTCAATCTTCTGGCTC 2862
Query 64786 AAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAG 64845
|| ||||| || ||||||||||||| | || || ||||| || ||||| || ||||||
Sbjct 2861 AAGAAGCGCGGTTTGATGCCAGGTCTCACCTTCTCAAACGAACTCATCTCACGTGACGAG 2802
Query 64846 GGGCTCCACCAAGAATTTGCGGTTACC--CTGTTCAGCCACCTCAAGGACAAACCATCAC 64903
|| | ||| || ||||| || || ||||||| || || | | || ||| ||
Sbjct 2801 GGCTTGCACTGTGACTTTGC--TTGCCTGATGTTCAGACATCTTGAACAGAAGCCACCA- 2745
Query 64904 ATGGGAC-TATAATTGATATAGTAAAATCGGCTGTAGAAATTGAAAAGGAATTCATTACT 64962
| || || | || || || | | ||||||| | |||||| | || || | ||
Sbjct 2744 AAGGAACGCGTTATCGAGATCATCTCAGAGGCTGTAAAGATTGAACAAGAGTTTCTGACC 2685
Query 64963 GCCGCGCTTCCGTGTCGTC-TCATCGGCATGGA-TGCCGATAAGATGAAACAGTATATCG 65020
| ||| |||||||| || | | |||||||| | ||| || | ||| | || ||||
Sbjct 2684 GACGCCCTTCCGTG-CGACATGCTCGGCATGAACTGCGGACTA-ATGTCTGAATACATCG 2627
Query 65021 AATTTGTAGCAGATCGCCTGCTTACTCAGTTTGGTATT---AAGCCCTACTGGAATTCTT 65077
| || || || ||||| || || | || |||| || ||| |||| ||| |
Sbjct 2626 AGTTCGTGGCCGATCGTCTTCTGTCCGAGCTTGGAGTTGGAAAGATCTAC---AATACCA 2570
Query 65078 CAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTTGAAA 65137
|||||| || || ||||| ||||| || ||||| ||||| || || || || |
Sbjct 2569 AAAATCCCTTCTCCTTCATGGAATCGATCTCGCTCGAGGGAAAGACGAATTTCTTCGAGA 2510
Query 65138 AGAGGGTAGGTGATTACTCAAAG 65160
||| || || || ||| ||||
Sbjct 2509 AGAAAGTGGGAGAATACCAAAAG 2487
>seq426
Length=67415
Score = 96.9 bits (106), Expect = 4e-15
Identities = 252/380 (66%), Gaps = 6/380 (2%)
Strand=Plus/Plus
Query 31963 CGGTCCATTCCACACGTGGCGGACGGCCTCAAGCCTTCACAGCGCAAGGTGATATACGCC 32022
|| ||||||||| ||| | ||||| | ||||| ||||||||||| || | | ||
Sbjct 24821 CGTTCCATTCCATGCGTCGTCGACGGTTTAAAGCCCGGCCAGCGCAAGGTTATCTTCACC 24880
Query 32023 TGCCTCAAGAAGAACCTGTCGA--GTGACATGAAGGTGGCGCAGCTGTCGGGCTACGTGG 32080
||| | ||| ||| | | | |||| | ||||| || || || | || | || |
Sbjct 24881 TGCTTAAAGCGTAAC--GACAAACGTGAAGTCAAGGTTGCACAATTGGCTGGTTCGGTCG 24938
Query 32081 CAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAGGGCACCATTGTCAACCTTG 32140
| || | || || || ||||| || || || || || || || ||||| ||||
Sbjct 24939 CTGAAATGTCAGCATACCATCACGGTGAAGCATCTCTGTGCGGTACAATCGTCAATCTTG 24998
Query 32141 CTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCATCTGGACAGTTTGGGA 32200
|||| |||| ||||| || || || ||||| ||| |||| || ||||| || |
Sbjct 24999 CTCAAAACTACGTCGGCAGCAACAATCTCAACTTGCTCCAGCCCAACGGTCAGTTCGGTA 25058
Query 32201 CCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATCTTCACCCGTCTCGCAC 32260
| | | || || |||||||| || ||| | ||||||||||||||| || |||
Sbjct 25059 CAAGATTGGCTGGCGGCAAGGACAGCGCTAGCCCTCGTTACATCTTCACCATGCTTTCAC 25118
Query 32261 C-TTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGGTGCTCAAGTACAATTTTGAT 32319
| ||| | || |||||| ||||| |||||| | ||||||||| | |||
Sbjct 25119 CGCTCG-CTCGTCTTATTTTCCACCCGCACGACGATCCATTGCTCAAGTTCCTGGACGAT 25177
Query 32320 GACGGTCAGCGGGTCGAGCC 32339
||| |||||| | |||||
Sbjct 25178 GACAATCAGCGCATTGAGCC 25197
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570274776986640
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