Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq108 136 3e-27 seq29 129 5e-25 seq496 104 2e-17 >seq108 Length=162490 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| || ||||||||| | || || || || || || || || Sbjct 112063 ATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGCCATCG 112004 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||||||| |||||||| || || ||||| Sbjct 112003 GACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCAGATCAG 111944 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||| ||||| || | |||||| || || | ||| |||||| Sbjct 111943 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAAGACGGTCGCACATTGAGCGACTACAAC 111884 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||||||||| | || |||||| | ||| | || ||||| || Sbjct 111883 ATTCAGAAGGAGTCGACACTTCACTTGGTTCTCCGTCTTCGTGGTGGTAT 111834 >seq29 Length=258594 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 ||||||||| || || || ||||| |||| || || | ||||| || || || || || Sbjct 96419 CGCCATGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATTACCCTCGAGGTTGAGCC 96478 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 || ||| | || || | ||||| || || || |||||||||||||| || || || Sbjct 96479 ATCGGACACTATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGA 96538 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 || ||||| || || | |||||| || ||||||||||| | || | ||| || Sbjct 96539 CCAGCAGCGATTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGTACTCTGAGCGACTA 96598 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||| |||||||||||||| | || ||||| | ||| |||| ||||| Sbjct 96599 CAACATCCAAAAGGAGTCGACACTTCACTTGGTCCTCCGTCTGCGTGGTGG 96649 >seq496 Length=57215 Score = 104 bits (114), Expect = 2e-17 Identities = 196/283 (69%), Gaps = 4/283 (1%) Strand=Plus/Plus Query 135461 ACGCATGACCCGTTGTGGAACGCGGCACAACGGCAGCTTAAGCGA-GAAGGCAAAATGCA 135519 ||||||||| |||||||| || || ||| ||| || || | |||||||||||||| Sbjct 40565 ACGCATGACGACTTGTGGAATGCCGCTCAAAACCAG-TTGCGCAAAGAAGGCAAAATGCA 40623 Query 135520 CGGATTTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGA 135579 ||| || | || ||||| ||||| || ||||| | || ||| || |||| | || Sbjct 40624 CGGTTTCCTTCGAATGTACTGGGCCAAGAAGATCCTCGAGTGGATGTCAACGCCAGATGA 40683 Query 135580 GGCGCTACAACAC-GCAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAA 135638 || || ||| || || | | || ||| ||||| || || ||||| ||| ||| Sbjct 40684 AGCTCTTGC-CACTGCTATCTACCTCAACGATCGCTACAACTTGGACGGACGTGATCCAA 40742 Query 135639 ATGGCTACGTAGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGC 135698 | || ||||| || || |||||| ||| | || | ||||| || ||||| || | Sbjct 40743 ACGGATACGTCGGATGCATGTGGAGCATTGGAGGAATTCACGACATGGGCTGGAAAGAAC 40802 Query 135699 GCAAAGTGTTTGGCAAGATTCGCTATATGAACTATGACGGTTG 135741 | | || || |||||||| | ||||||||||| || || || Sbjct 40803 GAGATGTATTCGGCAAGATCAGGTATATGAACTACGAAGGCTG 40845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434891233909440