Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq108 140 8e-28
seq29 140 8e-28
seq1542 107 4e-18
seq1975 104 5e-17
>seq108
Length=162490
Score = 140 bits (154), Expect = 8e-28
Identities = 168/226 (74%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGG 210951
|||||| | || || | |||||| || ||||| || || ||||| || || | ||| |
Sbjct 111842 ACGAAGACGGAGAACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTCAATG- 111900
Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011
| | || ||||| ||||||||||| |||||||| || || || || || ||||||| |
Sbjct 111901 TGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGC 111960
Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGA 211071
|||||||||| |||||||| || || ||||| || ||||| || || |||||||
Sbjct 111961 CTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGACCTCGA 112020
Query 211072 GAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
| ||||| ||||| || ||||| || || || || | ||||| ||
Sbjct 112021 GGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCATCTT 112066
>seq29
Length=258594
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | |||||| || ||||| ||||||||||| || || || || | |||||||
Sbjct 96634 AGGACCAAGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTCAGAGTACGTCCATCT 96575
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| ||||| || |||||||| | || || ||||| || |||| ||||| ||||||
Sbjct 96574 TCCAATTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCC 96515
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || |||||||| ||||| || ||||||||||| || || ||
Sbjct 96514 TGGATCTTGGCCTTGACATTTTCGATAGTGTCCGATGGCTCAACCTCGAGGGTAATGGTT 96455
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| ||||| | || || || || | |||||
Sbjct 96454 TTACCCGTCAATGTTTTGACGAAGATTTGCAT 96423
>seq1542
Length=4837
Score = 107 bits (118), Expect = 4e-18
Identities = 101/129 (78%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
|| || ||||| || || | |||||||||||||||||||||| || || ||||| |||
Sbjct 8 CGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATG 67
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACC 211109
| ||| ||| ||||||||||||||||| |||||||| || | ||||| || || |
Sbjct 68 GAGTCGGAGGGCTCAACCTCGAGAGTGATGGTCTTTCCGGTCAATGTCTTGACGAAGATT 127
Query 211110 TGCATTTTA 211118
|||||| ||
Sbjct 128 TGCATTCTA 136
Score = 96.9 bits (106), Expect = 8e-15
Identities = 89/113 (79%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 211002 GGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT 211061
|| |||| ||||||||||||||||||||| || ||||||||||||||||| ||
Sbjct 4836 GGGGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTTTCGATGGTGTCTGATGGC 4777
Query 211062 TCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||||||||| ||||| ||||| || || | || || ||||| | |||||
Sbjct 4776 TCAACCTCGAGGGTGATGGTCTTGCCTGTCAATGTTTTGACAAAGATTTGCAT 4724
>seq1975
Length=2172
Score = 104 bits (114), Expect = 5e-17
Identities = 126/169 (75%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAA 210948
|| ||| || | || || | ||| || || || ||||| |||||||| || || | |||
Sbjct 1989 TCCACGGAGACGAAGAACCAAGTGCAGTGTCGATTCTTTCTGGATGTTGTAGTCGCTCAA 2048
Query 210949 GGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008
|| | | |||||||| |||||||| || || ||||| | || || ||||| || || |
Sbjct 2049 GG-TGCGACCATCTTCGAGCTGCTTTCCAGCAAAGATCAATCGCTGCTGGTCTGGGGGGA 2107
Query 211009 CTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGA 211057
||||||||| |||||||||||| || ||||| || |||| ||| ||
Sbjct 2108 TTCCTTCCTTATCCTGGATCTTTGCCTTAACGTTCTCAATGGAGTCTGA 2156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159077786379905
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |