Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq108 136 9e-27
seq4997 129 1e-24
seq1542 93.3 1e-13
>seq108
Length=162490
Score = 136 bits (150), Expect = 9e-27
Identities = 165/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | ||| || || || || || || | ||||| ||| ||| ||
Sbjct 111842 ACGAAGACGGAGAACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTCAATGT 111901
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || ||||| |||||||| ||||||||||| || || || || || || ||||| ||
Sbjct 111902 GCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCC 111961
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||||||||||||| ||| ||| ||| || ||||| || | || || || |
Sbjct 111962 TTCCTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGACCTCGAG 112021
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| |||||||| || | ||||| | ||| | |||||| ||
Sbjct 112022 GGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCATCTT 112066
>seq4997
Length=15912
Score = 129 bits (142), Expect = 1e-24
Identities = 135/176 (77%), Gaps = 1/176 (1%)
Strand=Plus/Minus
Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610
|||| | || ||||| ||| | || || ||||| ||||| || ||||| ||| | |||||
Sbjct 14108 CCAAATCTATAACGTAATTGTAACAGCACATGCTTTTGTAATAATTTTTTTTATAGTTAT 14049
Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTC-GTTCCTTTAATGATTGGTGCTCCTG 7669
|| || | || || || || ||||||||||| ||||| ||||| |||| || ||||
Sbjct 14048 ACCAATTTTAATTGGAGGATTTGGAAATTGATTAAGTTCCATTAATACTTGGAGCCCCTG 13989
Query 7670 ATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTA 7725
|||| ||||||||| | | || || ||||||||||||||| |||| || || |||
Sbjct 13988 ATATAGCTTTTCCACGTATAAATAACATAAGTTTTTGATTATTACCTCCATCATTA 13933
Score = 89.7 bits (98), Expect = 1e-12
Identities = 79/99 (80%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
||| || || ||||||||||| ||||| ||||| || | ||||| || ||||| || |
Sbjct 13534 TTCTGGGTGTCCAAAAAATCAAAATAAGTGTTGGTATAAAATAGGGTCCCCTCCTCCAGC 13593
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770
|| ||||||||| |||||| ||||||| |||||||||
Sbjct 13594 AGGGTCAAAAAAGGAAGTATTTAAATTTCGATCAGTTAA 13632
>seq1542
Length=4837
Score = 93.3 bits (102), Expect = 1e-13
Identities = 102/136 (75%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 225582 GATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGC 225641
||| | ||| || ||||| || || || ||||||||||| ||||||||| ||| |||
Sbjct 1 GATCAATCGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGGATCTTTGCCTTGACATT 60
Query 225642 TTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTAT 225701
||| |||| ||| |||| || || || | ||||| ||||| || ||||| || || |
Sbjct 61 TTCAATGGAGTCGGAGGGCTCAACCTCGAGAGTGATGGTCTTTCCGGTCAATGTCTTGAC 120
Query 225702 GAACACTTGCATTTTA 225717
||| | ||||||| ||
Sbjct 121 GAAGATTTGCATTCTA 136
Score = 87.8 bits (96), Expect = 4e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 225601 GGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTT 225660
|| ||||| ||||||||||| |||||||| ||| || ||||||||||||||| |
Sbjct 4836 GGGGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTTTCGATGGTGTCTGATGGC 4777
Query 225661 TCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || | ||||| |||||||| ||||| ||||| | || | ||||||
Sbjct 4776 TCAACCTCGAGGGTGATGGTCTTGCCTGTCAATGTTTTGACAAAGATTTGCAT 4724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192454849307918
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |