Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq108 136 9e-27 seq4997 129 1e-24 seq1542 93.3 1e-13 >seq108 Length=162490 Score = 136 bits (150), Expect = 9e-27 Identities = 165/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| || || || || || || | ||||| ||| ||| || Sbjct 111842 ACGAAGACGGAGAACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTCAATGT 111901 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| |||||||| ||||||||||| || || || || || || ||||| || Sbjct 111902 GCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCC 111961 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||||||||| ||| ||| ||| || ||||| || | || || || | Sbjct 111962 TTCCTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGACCTCGAG 112021 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||||||| || | ||||| | ||| | |||||| || Sbjct 112022 GGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCATCTT 112066 >seq4997 Length=15912 Score = 129 bits (142), Expect = 1e-24 Identities = 135/176 (77%), Gaps = 1/176 (1%) Strand=Plus/Minus Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610 |||| | || ||||| ||| | || || ||||| ||||| || ||||| ||| | ||||| Sbjct 14108 CCAAATCTATAACGTAATTGTAACAGCACATGCTTTTGTAATAATTTTTTTTATAGTTAT 14049 Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTC-GTTCCTTTAATGATTGGTGCTCCTG 7669 || || | || || || || ||||||||||| ||||| ||||| |||| || |||| Sbjct 14048 ACCAATTTTAATTGGAGGATTTGGAAATTGATTAAGTTCCATTAATACTTGGAGCCCCTG 13989 Query 7670 ATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTA 7725 |||| ||||||||| | | || || ||||||||||||||| |||| || || ||| Sbjct 13988 ATATAGCTTTTCCACGTATAAATAACATAAGTTTTTGATTATTACCTCCATCATTA 13933 Score = 89.7 bits (98), Expect = 1e-12 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||| || || ||||||||||| ||||| ||||| || | ||||| || ||||| || | Sbjct 13534 TTCTGGGTGTCCAAAAAATCAAAATAAGTGTTGGTATAAAATAGGGTCCCCTCCTCCAGC 13593 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 || ||||||||| |||||| ||||||| ||||||||| Sbjct 13594 AGGGTCAAAAAAGGAAGTATTTAAATTTCGATCAGTTAA 13632 >seq1542 Length=4837 Score = 93.3 bits (102), Expect = 1e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 225582 GATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGC 225641 ||| | ||| || ||||| || || || ||||||||||| ||||||||| ||| ||| Sbjct 1 GATCAATCGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGGATCTTTGCCTTGACATT 60 Query 225642 TTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTAT 225701 ||| |||| ||| |||| || || || | ||||| ||||| || ||||| || || | Sbjct 61 TTCAATGGAGTCGGAGGGCTCAACCTCGAGAGTGATGGTCTTTCCGGTCAATGTCTTGAC 120 Query 225702 GAACACTTGCATTTTA 225717 ||| | ||||||| || Sbjct 121 GAAGATTTGCATTCTA 136 Score = 87.8 bits (96), Expect = 4e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 225601 GGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTT 225660 || ||||| ||||||||||| |||||||| ||| || ||||||||||||||| | Sbjct 4836 GGGGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTTTCGATGGTGTCTGATGGC 4777 Query 225661 TCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||||| |||||||| ||||| ||||| | || | |||||| Sbjct 4776 TCAACCTCGAGGGTGATGGTCTTGCCTGTCAATGTTTTGACAAAGATTTGCAT 4724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192454849307918