Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq596 197 1e-45
>seq596
Length=46163
Score = 197 bits (218), Expect = 1e-45
Identities = 558/841 (66%), Gaps = 16/841 (2%)
Strand=Plus/Plus
Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307
||||| | ||||||||||| ||| ||| ||||||||||| || || || || | |
Sbjct 2479 ACACCGGACTTTTGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGC 2538
Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGA 4367
|| || |||||| || || ||||| | | |||| | | |||| ||| | |
Sbjct 2539 GAGATCGATTCCATGAAGGAGAAGGGATTTTTGGTATTGT-AGATCTTTCCAACTCCA-A 2596
Query 4368 GCT---ACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTA 4424
||| || || | || || || || || || || || | ||| ||| |||||||
Sbjct 2597 GCTCGGAC-AGAAGACGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTC 2655
Query 4425 ATTCCAATTA-ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGC 4483
|| || | | || ||| || || |||| |||| |||||||||||| || |||| ||
Sbjct 2656 ATGCCGAGCATGTCGCAC-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGC 2714
Query 4484 TTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAA 4543
|||| ||| || || | | || || | ||| || | | | | | || ||||
Sbjct 2715 CTCTGAGATGATCTCGATAACGCGTTCCTTTGGTGGCTTCTGTTCAAGATGTCTGAACAT 2774
Query 4544 TAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGT 4603
| || ||||| ||||| ||||| || ||||| | || |||||||| || || ||
Sbjct 2775 CAGGCAAGCAAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGT 2834
Query 4604 TAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAA 4663
| || ||||| ||||| | ||| || ||||| || || | |||||| || ||
Sbjct 2835 GAGACCTGGCATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAA 2894
Query 4664 GAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCT-GGCTTTGT 4722
||| || ||||| || || ||||| || | |||| | | | || || | | ||||||
Sbjct 2895 GAAAATTCCTTCGACAGCAGCAAAGGCGA-TAATGCGTTCTCCAA--AGTTAGCCTTTGT 2951
Query 4723 -CT-TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATAT 4780
|| ||||| | || ||||||| ||| |||||||| || ||||| | | | |
Sbjct 2952 GCTGGCGATCCAGTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGAC 3011
Query 4781 AGCGTTAAATAATTTACT-TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839
||||| || || | | || || |||| ||| || || || || || ||
Sbjct 3012 GGCGTTGAA-AAGGAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGCG 3070
Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899
||||| || || || | |||||| || || ||||| || || || ||||| | || |
Sbjct 3071 AGTACATCTCGGAGTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCT 3130
Query 4900 CTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCAC 4959
|||| ||||| ||||| | | || | ||| || | ||| ||||| || || |||||
Sbjct 3131 CTGTGACTTGCACTTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGG 3190
Query 4960 TGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTT 5019
||||| || || |||| |||||| || ||||| | | ||| ||| | || |
Sbjct 3191 AAGCTGCGAAGAAGGCCAGAACATGGGAGATAAAATGACGCTCGGTGTCCTTCAAGTTGT 3250
Query 5020 TCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCG 5079
|||||| | || || || | ||||| |||||||| || |||||||| || ||||| |
Sbjct 3251 TCCAGTCGTTCATGTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGCTTCAG 3310
Query 5080 C 5080
|
Sbjct 3311 C 3311
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427023592279001
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |