Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq596 196 7e-45 seq1280 127 3e-24 >seq596 Length=46163 Score = 196 bits (216), Expect = 7e-45 Identities = 545/828 (66%), Gaps = 11/828 (1%) Strand=Plus/Plus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 ||||| ||||| ||||| |||||||| ||||| || || || || | || || | Sbjct 2488 TTTTGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGAT 2547 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 ||||| || || ||||| | ||| || || ||| || ||| | || || | Sbjct 2548 TCCATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGA 2607 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAA-G 48028 || | ||| || ||||| || || ||| ||| | | | || ||||| || | | | Sbjct 2608 AGACGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATG 2667 Query 48029 TTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088 | || || || || || || |||||||||||||| || | ||||| || || || Sbjct 2668 TCGCAC-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGAT 2726 Query 48089 CGATGTTACCGTTTCCTCACTTGGTGGATACAA--CAA-ATGTTTAAACATTAAACATGC 48145 | | || ||||| ||||||| | | ||| |||| | ||||| | || || Sbjct 2727 CTCGATAACGCGTTCCT---TTGGTGGCTTCTGTTCAAGATGTCTGAACATCAGGCAAGC 2783 Query 48146 AAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGG 48205 ||| ||||| || | || || || | || | |||||| || || |||||||| || Sbjct 2784 AAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGG 2843 Query 48206 CATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCC 48265 ||| | || || || |||||||| || |||| || || ||| ||||| || || Sbjct 2844 CATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCC 2903 Query 48266 TTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGC-TTCGTTGTGT--ATCCA 48322 ||| || || ||||| ||| ||| | ||||| | | || || || || ||||| Sbjct 2904 TTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGTGCTGGCGATCCA 2963 Query 48323 CCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 48382 ||||| |||||||| ||||||||||| || | | || | || || || || Sbjct 2964 GTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTGAAAAG 3023 Query 48383 AAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGA 48442 |||| || || ||| ||| ||| || || || | ||| ||||| ||||| Sbjct 3024 GAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGCGAGTACATCTCGGA 3083 Query 48443 GTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTAC 48502 ||| | |||||| || || ||||| || || || || || | || ||||||| || || Sbjct 3084 GTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTGCAC 3143 Query 48503 CTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAA 48562 ||| | || |||||| | | ||||| || || || || || ||| || || || Sbjct 3144 TTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGCGAAGAA 3203 Query 48563 TGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGAT 48622 || | ||||| ||||||| ||| || ||| || |||||||| || || Sbjct 3204 GGCCAGAACATGGGAGATAAAATGACGCTCGGTGTCCTTCAAGTTGTTCCAGTCGTTCAT 3263 Query 48623 ATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670 || ||||| | ||| |||||||| ||||||||||||| || || || Sbjct 3264 GTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGCTTCAGC 3311 >seq1280 Length=9399 Score = 127 bits (140), Expect = 3e-24 Identities = 605/949 (64%), Gaps = 28/949 (3%) Strand=Plus/Minus Query 77970 GGGCACATCAATGACCAGTCACCATCTTCCTT-AACTCGTTTCATAAAGAGATCAGGTAT 78028 || |||||||| |||||| | || | | | || ||| || ||| || | ||| || || Sbjct 2066 GGACACATCAACGACCAGACTCCGT-TGCTTTCAACGCGACGCATGAACAAATCGGGAAT 2008 Query 78029 CCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAG 78088 ||| | ||| || | || || | | | |||||| || || || || || || || Sbjct 2007 CCACAAAGCGTAGAACATGTCACGAGCACGAACTTCTTCTTTGCCAGTGTTTTTCTTGAG 1948 Query 78089 ATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGG 78148 |||||| ||||| | | || ||||| || || ||||| ||||| | | | || || Sbjct 1947 ATCGAGGAACTCGAAGACGTCGCCGTGCCACGGCTCGAGATAAATTGCGAAAGCACCTGG 1888 Query 78149 TCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGG 78208 ||| || || || || || |||| ||| | |||||||| || ||||| | ||||||||| Sbjct 1887 TCGCTTGTTTCCGCCTTGGTCTACATAGCGAGCGGTGTTGTTGTAAACACGCAACATTGG 1828 Query 78209 AATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT--A 78266 || || ||||| || | || || || || | ||||| |||| | |||||||| | Sbjct 1827 AACAAGTCCGTTTGAGATCCCGTTGGTGCCGGCGATATACGTTCCCTTGGCGCGAATACA 1768 Query 78267 TTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAAT 78326 | | | || | || || || || ||| ||| || | |||||| |||||| Sbjct 1767 GTGCACGTTGACA--CCGATACCGCCAGCCGACTTGCTGATCAAAGCGCATTGTTTCAGC 1710 Query 78327 GTATCGTAGATACCCTCTATACTGTCATCCATCAT-GTTAAGAAGAAAACAGCTAGACAT 78385 |||||||| || || || || |||||| ||| | || ||| ||||| || | Sbjct 1709 GTATCGTAAATGCCGTCAATTGAGTCATCGGACATCGACAACAAG-AAACACGACGAAAG 1651 Query 78386 TTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTC 78445 || | || || | || || | || || || ||||| || || | ||| Sbjct 1650 CTGCGGGCGAGGCGTAGCGGCGGCGAAGAGAGTTGGCGAGGCATGGGTGAAGTAGCGTTC 1591 Query 78446 AGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC----CCATTGATGAATTCCTA 78501 ||| | || ||||| || ||||| || || || ||||| |||| |||| || | Sbjct 1590 AGACAAAAGGTTGTAAGTCTCAATGGCCGAGTCGATGTCTTCACCATGGATG----CCCA 1535 Query 78502 CCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACA 78561 | || || | ||| | ||| || || || | || | |||| || | |||| || Sbjct 1534 CGGCAACTCTCATGAGCATGTGTTGCGGGCGCTCGGCGATCTTGCCTTTGTTCTTCAGCA 1475 Query 78562 AGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAA 78621 |||| |||||||| || || || || || ||||| ||||| | ||||| | Sbjct 1474 AGTAGCTGCGCTCCAAAGTCTTGAATCCGAAGTAATTGTAGCCGAAGTCGCGGTCGTAGA 1415 Query 78622 TAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATC--CATGACAGTAGTTGA 78679 | || |||| || | ||| | || | | ||| || ||| ||| || Sbjct 1414 TGATGGCAGAGTTCAAGCGATCAGCATTCTTCATGATAATTTCGTGATGGAAGTCACTG- 1356 Query 78680 AATAATAGGAGATCG----TACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCA 78735 || || || | ||| | || | || | | ||| ||| | || || |||| Sbjct 1355 -ATCATCGGCGCTCGCGTCTTCAAGAATT---CGTTCTCCAT-GTTGTACAAGTCGTCCA 1301 Query 78736 TTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAG 78795 | ||||| || ||| |||| || ||||||||||| ||||| || || || || | |||| Sbjct 1300 TGACATCGCTGAATTGTTTCTTGGTTTCCTTGTGCAGATTCGACACGGCGATGCGAGCAG 1241 Query 78796 CTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAA 78855 | || | ||| || || | ||| | || || ||||| || | || || || | Sbjct 1240 CGAGCACAGCGTAGTCGGCATGGTCGGTGGTCATCGTGGCAGCAGTCTCAGCTGCCAGGT 1181 Query 78856 TATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTT 78904 | || | ||| || ||||| || |||| || || ||||||||| Sbjct 1180 TGTCGAGCTCACATGTAGTGACGCCGGTATAAAGGCCGCTAATAACTTT 1132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694625409250080