Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq596 196 7e-45
seq1280 127 3e-24
>seq596
Length=46163
Score = 196 bits (216), Expect = 7e-45
Identities = 545/828 (66%), Gaps = 11/828 (1%)
Strand=Plus/Plus
Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909
||||| ||||| ||||| |||||||| ||||| || || || || | || || |
Sbjct 2488 TTTTGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGAT 2547
Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969
||||| || || ||||| | ||| || || ||| || ||| | || || |
Sbjct 2548 TCCATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGA 2607
Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAA-G 48028
|| | ||| || ||||| || || ||| ||| | | | || ||||| || | | |
Sbjct 2608 AGACGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATG 2667
Query 48029 TTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088
| || || || || || || |||||||||||||| || | ||||| || || ||
Sbjct 2668 TCGCAC-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGAT 2726
Query 48089 CGATGTTACCGTTTCCTCACTTGGTGGATACAA--CAA-ATGTTTAAACATTAAACATGC 48145
| | || ||||| ||||||| | | ||| |||| | ||||| | || ||
Sbjct 2727 CTCGATAACGCGTTCCT---TTGGTGGCTTCTGTTCAAGATGTCTGAACATCAGGCAAGC 2783
Query 48146 AAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGG 48205
||| ||||| || | || || || | || | |||||| || || |||||||| ||
Sbjct 2784 AAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGG 2843
Query 48206 CATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCC 48265
||| | || || || |||||||| || |||| || || ||| ||||| || ||
Sbjct 2844 CATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCC 2903
Query 48266 TTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGC-TTCGTTGTGT--ATCCA 48322
||| || || ||||| ||| ||| | ||||| | | || || || || |||||
Sbjct 2904 TTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGTGCTGGCGATCCA 2963
Query 48323 CCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 48382
||||| |||||||| ||||||||||| || | | || | || || || ||
Sbjct 2964 GTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTGAAAAG 3023
Query 48383 AAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGA 48442
|||| || || ||| ||| ||| || || || | ||| ||||| |||||
Sbjct 3024 GAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGCGAGTACATCTCGGA 3083
Query 48443 GTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTAC 48502
||| | |||||| || || ||||| || || || || || | || ||||||| || ||
Sbjct 3084 GTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTGCAC 3143
Query 48503 CTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAA 48562
||| | || |||||| | | ||||| || || || || || ||| || || ||
Sbjct 3144 TTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGCGAAGAA 3203
Query 48563 TGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGAT 48622
|| | ||||| ||||||| ||| || ||| || |||||||| || ||
Sbjct 3204 GGCCAGAACATGGGAGATAAAATGACGCTCGGTGTCCTTCAAGTTGTTCCAGTCGTTCAT 3263
Query 48623 ATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670
|| ||||| | ||| |||||||| ||||||||||||| || || ||
Sbjct 3264 GTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGCTTCAGC 3311
>seq1280
Length=9399
Score = 127 bits (140), Expect = 3e-24
Identities = 605/949 (64%), Gaps = 28/949 (3%)
Strand=Plus/Minus
Query 77970 GGGCACATCAATGACCAGTCACCATCTTCCTT-AACTCGTTTCATAAAGAGATCAGGTAT 78028
|| |||||||| |||||| | || | | | || ||| || ||| || | ||| || ||
Sbjct 2066 GGACACATCAACGACCAGACTCCGT-TGCTTTCAACGCGACGCATGAACAAATCGGGAAT 2008
Query 78029 CCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAG 78088
||| | ||| || | || || | | | |||||| || || || || || || ||
Sbjct 2007 CCACAAAGCGTAGAACATGTCACGAGCACGAACTTCTTCTTTGCCAGTGTTTTTCTTGAG 1948
Query 78089 ATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGG 78148
|||||| ||||| | | || ||||| || || ||||| ||||| | | | || ||
Sbjct 1947 ATCGAGGAACTCGAAGACGTCGCCGTGCCACGGCTCGAGATAAATTGCGAAAGCACCTGG 1888
Query 78149 TCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGG 78208
||| || || || || || |||| ||| | |||||||| || ||||| | |||||||||
Sbjct 1887 TCGCTTGTTTCCGCCTTGGTCTACATAGCGAGCGGTGTTGTTGTAAACACGCAACATTGG 1828
Query 78209 AATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT--A 78266
|| || ||||| || | || || || || | ||||| |||| | |||||||| |
Sbjct 1827 AACAAGTCCGTTTGAGATCCCGTTGGTGCCGGCGATATACGTTCCCTTGGCGCGAATACA 1768
Query 78267 TTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAAT 78326
| | | || | || || || || ||| ||| || | |||||| ||||||
Sbjct 1767 GTGCACGTTGACA--CCGATACCGCCAGCCGACTTGCTGATCAAAGCGCATTGTTTCAGC 1710
Query 78327 GTATCGTAGATACCCTCTATACTGTCATCCATCAT-GTTAAGAAGAAAACAGCTAGACAT 78385
|||||||| || || || || |||||| ||| | || ||| ||||| || |
Sbjct 1709 GTATCGTAAATGCCGTCAATTGAGTCATCGGACATCGACAACAAG-AAACACGACGAAAG 1651
Query 78386 TTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTC 78445
|| | || || | || || | || || || ||||| || || | |||
Sbjct 1650 CTGCGGGCGAGGCGTAGCGGCGGCGAAGAGAGTTGGCGAGGCATGGGTGAAGTAGCGTTC 1591
Query 78446 AGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC----CCATTGATGAATTCCTA 78501
||| | || ||||| || ||||| || || || ||||| |||| |||| || |
Sbjct 1590 AGACAAAAGGTTGTAAGTCTCAATGGCCGAGTCGATGTCTTCACCATGGATG----CCCA 1535
Query 78502 CCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACA 78561
| || || | ||| | ||| || || || | || | |||| || | |||| ||
Sbjct 1534 CGGCAACTCTCATGAGCATGTGTTGCGGGCGCTCGGCGATCTTGCCTTTGTTCTTCAGCA 1475
Query 78562 AGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAA 78621
|||| |||||||| || || || || || ||||| ||||| | ||||| |
Sbjct 1474 AGTAGCTGCGCTCCAAAGTCTTGAATCCGAAGTAATTGTAGCCGAAGTCGCGGTCGTAGA 1415
Query 78622 TAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATC--CATGACAGTAGTTGA 78679
| || |||| || | ||| | || | | ||| || ||| ||| ||
Sbjct 1414 TGATGGCAGAGTTCAAGCGATCAGCATTCTTCATGATAATTTCGTGATGGAAGTCACTG- 1356
Query 78680 AATAATAGGAGATCG----TACACCATTTTTAGGATTAACATAGTTAAATAAATCTTCCA 78735
|| || || | ||| | || | || | | ||| ||| | || || ||||
Sbjct 1355 -ATCATCGGCGCTCGCGTCTTCAAGAATT---CGTTCTCCAT-GTTGTACAAGTCGTCCA 1301
Query 78736 TTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAG 78795
| ||||| || ||| |||| || ||||||||||| ||||| || || || || | ||||
Sbjct 1300 TGACATCGCTGAATTGTTTCTTGGTTTCCTTGTGCAGATTCGACACGGCGATGCGAGCAG 1241
Query 78796 CTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCCGCTAAAA 78855
| || | ||| || || | ||| | || || ||||| || | || || || |
Sbjct 1240 CGAGCACAGCGTAGTCGGCATGGTCGGTGGTCATCGTGGCAGCAGTCTCAGCTGCCAGGT 1181
Query 78856 TATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAACTTT 78904
| || | ||| || ||||| || |||| || || |||||||||
Sbjct 1180 TGTCGAGCTCACATGTAGTGACGCCGGTATAAAGGCCGCTAATAACTTT 1132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694625409250080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |