Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq596 163 4e-35 seq1280 156 6e-33 >seq596 Length=46163 Score = 163 bits (180), Expect = 4e-35 Identities = 536/829 (65%), Gaps = 13/829 (2%) Strand=Plus/Plus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 ||||||||||| || || |||||||| ||||| || || || || | || || | Sbjct 2488 TTTTGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGAT 2547 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| || || ||||| | ||| || || ||| || ||| | || || | Sbjct 2548 TCCATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGA 2607 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 || | ||| || ||||| || || || ||| | | | || ||||| || | | Sbjct 2608 AGACGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATG 2667 Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578 | | ||| || || || || ||||||||||||||||| | ||||| || || || ||| Sbjct 2668 TCGCACGGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGATC 2727 Query 46579 GATGTTACTGTTTCCTCACTTGGTGGATGC--ATCAA-ATGTTTAAACATTAAACATGCA 46635 | || ||||| ||||||| | | |||| |||| | ||||| | || ||| Sbjct 2728 TCGATAACGCGTTCCT---TTGGTGGCTTCTGTTCAAGATGTCTGAACATCAGGCAAGCA 2784 Query 46636 AAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGC 46695 || ||||| || | ||| || || | || | |||||| || || ||||| || ||| Sbjct 2785 AAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGGC 2844 Query 46696 ATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCT 46755 || | || ||||| |||||||| || || | || || ||| ||||| || ||| Sbjct 2845 ATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCCT 2904 Query 46756 TCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG-----AATCC 46810 || ||||| || || |||| || | ||||| | | || | || || |||| Sbjct 2905 TCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGC--CTTTGTGCTGGCGATCC 2962 Query 46811 ACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGA 46870 | ||||| |||||||||||||||||||| || | | || | || || || | Sbjct 2963 AGTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTGAAAA 3022 Query 46871 GAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTG 46930 | |||| || | ||| ||| || || || || | ||| ||||| || | Sbjct 3023 GGAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGCGAGTACATCTCGG 3082 Query 46931 AATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTA 46990 | || | ||||| || || ||||| || || || || || | || || || | || | Sbjct 3083 AGTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTGCA 3142 Query 46991 CCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAA 47050 | || | || |||||| | ||||| || || || || || ||| || || | Sbjct 3143 CTTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGCGAAGA 3202 Query 47051 ATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGA 47110 | |||| ||||| ||||||| || | ||| || |||||||| || | Sbjct 3203 AGGCCAGAACATGGGAGATAAAATGACGCTCGGTGTCCTTCAAGTTGTTCCAGTCGTTCA 3262 Query 47111 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGC 47159 | || ||||| | ||| |||||||| ||||||| ||||| || || || Sbjct 3263 TGTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGCTTCAGC 3311 >seq1280 Length=9399 Score = 156 bits (172), Expect = 6e-33 Identities = 1342/2153 (62%), Gaps = 51/2153 (2%) Strand=Plus/Minus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 ||||||||||| | || ||||| || || || | ||||||||| || || || | Sbjct 3263 GTGAACTGAATTGCGTTGGCAGCTGGCTTGGTGCGCAAATAGTACATTCCGGTCTTCAAG 3204 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496 |||| |||| |||| ||| || || || ||||| || | || ||||| | Sbjct 3203 CCCATTTTCCAGCCGTGGAAGTGAATTGACGTCAGTTTTCCGTAGTTTGGCTCGGCGACG 3144 Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556 || | || | ||||| ||||||||||| || || | ||| || ||||| | || Sbjct 3143 TGCACGTTGAATGACTGCGACTGATCGATGAACGCACCGCGATCGGCTGCCATCTGGATC 3084 Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAA-AACTTGTTTGATATCATCTGGAAG 75615 ||||| | || ||||| | || ||| | |||| | ||| || | || | Sbjct 3083 TGCGTCTTGACTGACATCTCCCAGACGGTCTTGTACAACTCGCG-GATGTCGGCGGGGAT 3025 Query 75616 ATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATT 75672 || | || |||| |||||| || || || ||||| || || || | Sbjct 3024 CTTCTCGATGTTCTGAACTGATCCGTTGCTAGCGATGATCTCGTTCTTCATGTCGTCGTC 2965 Query 75673 CCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCC 75732 ||| | | || ||||| | | | | | |||||| |||| || || ||||||||||| Sbjct 2964 CCAGAGATCTCGTTCGGTGAGATCCTTGATGAGATGGTGATTGACGATCTGAAATTCTCC 2905 Query 75733 AGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCC 75792 || | || |||| | || ||||| || || || | ||| ||||| || Sbjct 2904 GCTCAGCGTGCGGCGGTTGTAGACGTTGCTGGTGTACGGCTCGAAGCTTTCGTTGTTGCC 2845 Query 75793 CAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACC 75852 | ||| || ||||| |||||||||||||| || || | | | ||| | | || Sbjct 2844 GAGAATCTGTGCAGTCGAAGCAGTCGGCATTGGAGCGAGGAGAAGTGAATTGCGCACTCC 2785 Query 75853 ATGTGTTCTG--ATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACA 75910 ||| || | || ||| | || || ||| ||||| | | | |||| Sbjct 2784 --GTGCTCGGCGATCTTAGCCTTCAGGACAGCCCAGTCCCACAAGTTGGTTGGTGTCTTT 2727 Query 75911 TCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAA 75970 ||||| | ||||| || | ||||| || | ||||| | || ||||||||| Sbjct 2726 TCCCACATGTCGTACTGCAAGATTCCTTTCGACACCGGCGATCCTTCGTAGGTTTCGTAA 2667 Query 75971 GTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCG 76030 || ||| || | || ||||| ||||| ||||| | ||| ||||| || || || ||| Sbjct 2666 GTACCGAGCTCTCTGGCGAGTTCACAACTTGCCTCAAGCGCGCCGTAGTAGATCGTCTCG 2607 Query 76031 AAAATCTTCTTATTAAGAT-CT-TGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAA 76088 || |||| || || || | || |||| || |||| | || |||||| | | Sbjct 2606 AAGATCTGCTGGTTCAGCTTCTGTGCGTTTGGCGACT--CGAACGGATAACTCATCGTGA 2549 Query 76089 TAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAA 76148 | || || || || || || |||| || ||||| || || | ||| | | | || || Sbjct 2548 TGAAAGCGTCGGCCAGGCCTTGAATGCCGATACCGATCGGGCGATGACGCATGTTCGATC 2489 Query 76149 TTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATT---TCTGA 76205 | ||| ||||| || ||||| || || | ||| || || || || | || | ||| Sbjct 2488 GCTTAGCCTCTGGGATCGGGTAGTAGTTGACATCGATGATCTTGTTCAAGTTCTTTGTGA 2429 Query 76206 CAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATC--AAATTTTCCAT----CTATCA 76259 || || || ||||| || || | || || || | || | | ||| Sbjct 2428 CAGTC---TTGGTGACTTCCTTGAGCTTTTGGAAGTCGTAAGTCTTGGCTGATGCGTTCA 2372 Query 76260 CAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCAT--TAGCATTGGC 76317 ||||||| || | ||| || ||||| ||||| || ||||| || || | | || ||| Sbjct 2371 CAAACATGTTGACAGCGATCGATGCCAGATTGCAGACGGCGACTTCGTCCTTGC--TGGA 2314 Query 76318 ATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTT 76377 ||| | || || |||||||| | || || || || || | || || ||||| Sbjct 2313 ATACTCGATGATTTCCGTGCACAAGTTGGAGCAACGAATGGTGCCGACGTTCTGCTGGTT 2254 Query 76378 GCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGA 76437 |||| ||| || | |||||| || | | | || || ||||| || | ||||| Sbjct 2253 CGACTTTCGGTTGCAAGCGTCCTTGTACAACATGTAAGGCGTGCCAGTCTCGACTTGTGA 2194 Query 76438 TTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTTCTCTCT 76497 ||||| || | ||| | | || ||| || || ||| || || Sbjct 2193 CTCGATGATGGCAAACCACAAGTCTTGAGCCTTGATCTGGCGGAGGTAACGGCCTTCGGC 2134 Query 76498 TTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACA 76557 ||| ||| || ||| || || || || ||||| || | | || ||||| Sbjct 2133 TTCGTATCTCTCGTACAACTTCTCGAACTCTTCGCCCCACGAGTCGTAGAGGCCTGGACA 2074 Query 76558 TTCATTCGGACACATCAATGACCACTCACCATCTTCCTT-AACCCGTTTCATAAAGAGAT 76616 | |||||||||||| ||||| | || | | | || ||| || ||| || | || Sbjct 2073 GCTGTGCGGACACATCAACGACCAGACTCCGT-TGCTTTCAACGCGACGCATGAACAAAT 2015 Query 76617 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCT 76676 | || ||||| | ||| || | || || | | | |||||| || || || || | Sbjct 2014 CGGGAATCCACAAAGCGTAGAACATGTCACGAGCACGAACTTCTTCTTTGCCAGTGTTTT 1955 Query 76677 TTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAA 76736 | || ||||| |||||||| | | || ||||| || || ||||| || || | | Sbjct 1954 TCTTGAGATCGAGGAACTCGAAGACGTCGCCGTGCCACGGCTCGAGATAAATTGCGAAAG 1895 Query 76737 CACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCA 76796 |||| ||||| || || || || || |||| ||| | || ||||| || ||||| | || Sbjct 1894 CACCTGGTCGCTTGTTTCCGCCTTGGTCTACATAGCGAGCGGTGTTGTTGTAAACACGCA 1835 Query 76797 ACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCAC 76856 ||||||||| || ||||| || | || || || || | ||||| |||| || | Sbjct 1834 ACATTGGAACAAGTCCGTTTGAGATCCCGTTGGTGCCGGCGATATACGTTCCCTTGGCGC 1775 Query 76857 GAAT--ATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCG 76914 |||| | | | | || | || || || || ||| || ||| | ||| || | Sbjct 1774 GAATACAGTGCACGTTGACA--CCGATACCGCCAGCCGACTTGCTGATCAAAGCGCATTG 1717 Query 76915 TTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCAT-GTTAAGAAGAAAACAGC 76973 ||||| || || || ||||| || || ||||| ||| | || ||| ||||| Sbjct 1716 TTTCAGCGTATCGTAAATGCCGTCAATTGAGTCATCGGACATCGACAACAAG-AAACACG 1658 Query 76974 TAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACC 77033 || | || | || || | || || | || || || ||||| ||||| Sbjct 1657 ACGAAAGCTGCGGGCGAGGCGTAGCGGCGGCGAAGAGAGTTGGCGAGGCATGGGTGAAGT 1598 Query 77034 ATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC----CCATTGATGA 77089 | |||||| | || ||||| || ||||| | | || || || |||| |||| Sbjct 1597 AGCGTTCAGACAAAAGGTTGTAAGTCTCAATGGCCGAGTCGATGTCTTCACCATGGATG- 1539 Query 77090 ATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATT 77149 || || || || | ||| | ||| || || || || || | |||| || | Sbjct 1538 ---CCCACGGCAACTCTCATGAGCATGTGTTGCGGGCGCTCGGCGATCTTGCCTTTGTTC 1482 Query 77150 TTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTT 77209 |||| |||||| |||||||| || || || || || ||||| ||||| | Sbjct 1481 TTCAGCAAGTAGCTGCGCTCCAAAGTCTTGAATCCGAAGTAATTGTAGCCGAAGTCGCGG 1422 Query 77210 TCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATGACAGTG 77269 ||||| || || | || || | || || || | | ||| | | ||| | Sbjct 1421 TCGTAGATGATGGCAGAGTTCAAGCGATCAGCATTCTTCATGATAAT-TTCGTGATGGAA 1363 Query 77270 GT-AGAAATAATTGGAGAT--CGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCT 77326 || | || || || | | ||| ||| | || | || | ||| | ||||| Sbjct 1362 GTCACTGATCATCGGCGCTCGCGTCTTCAAGAATTCG--TTCTCCATGTTGTACAAGTCG 1305 Query 77327 TCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTA 77386 ||||| || ||||| ||| |||| || ||||||||||| |||||||| ||||| || | | Sbjct 1304 TCCATGACATCGCTGAATTGTTTCTTGGTTTCCTTGTGCAGATTCGACACGGCGATGCGA 1245 Query 77387 GCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCT 77446 ||||| || | || ||||| | ||| | || || ||||| || | || || || Sbjct 1244 GCAGCGAGCACAGCGTAGTCGGCATGGTCGGTGGTCATCGTGGCAGCAGTCTCAGCTGCC 1185 Query 77447 AAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTT 77499 | | || | || ||||| || ||| |||| || || ||||||||| Sbjct 1184 AGGTTGTCGAGCTCACATGTAGTGACGCCGGTATAAAGGCCGCTAATAACTTT 1132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712889868335040