Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq29 154 3e-32
seq108 125 1e-23
seq1975 111 3e-19
seq2433 102 2e-16
seq1542 96.9 7e-15
>seq29
Length=258594
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| || || |||| || | || || |||||||||||||||||
Sbjct 96650 ACCACCACGCAGACGGAGGACCAAGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCT 96591
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || ||||| || | ||| || ||||| |||||||| || || ||||| ||
Sbjct 96590 CAGAGTACGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGG 96531
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || || ||||| |||||||| || || || | |||||||||||||| | || ||
Sbjct 96530 AATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTTTCGATAGTGTCCGATGGCTCAAC 96471
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| || || || ||||||||||| || || ||||| || |||||
Sbjct 96470 CTCGAGGGTAATGGTTTTACCCGTCAATGTTTTGACGAAGATTTGCAT 96423
>seq108
Length=162490
Score = 125 bits (138), Expect = 1e-23
Identities = 168/234 (72%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||| || | || || || || |||||||||||
Sbjct 111836 ACCACCACGAAGACGGAGAACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCT 111895
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
| ||||| || || || || || || || || ||||||| ||| || || || ||
Sbjct 111896 CAATGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGG 111955
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| || ||||||||||||||||| || || || | || || |||||||| | |||||
Sbjct 111956 AATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGAC 112015
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCAT 283105
||||| ||||| ||||| || || | || || ||||| || ||||| || ||
Sbjct 112016 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCATCTTGAT 112069
>seq1975
Length=2172
Score = 111 bits (122), Expect = 3e-19
Identities = 136/183 (74%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTC-AGC 282931
|| ||||| || ||||| |||| || | || |||||| |||||||||||||| |
Sbjct 1987 CCTCCACGGAGACGAAGAACCAAGTGCAGTGTCGATTCTTTCTGGATGTTGTAGTCGCTC 2046
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| ||||| || || || || || ||||||||||| || || ||||| ||
Sbjct 2047 AAG-GTGCGACCATCTTCGAGCTGCTTTCCAGCAAAGATCAATCGCTGCTGGTCTGGGGG 2105
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || ||||| || ||||||||||| || ||| | || || | ||| || | |||||
Sbjct 2106 GATTCCTTCCTTATCCTGGATCTTTGCCTTAACGTTCTCAATGGAGTCTGATGGCTCGAC 2165
Query 283052 TTC 283054
|||
Sbjct 2166 TTC 2168
>seq2433
Length=1189
Score = 102 bits (112), Expect = 2e-16
Identities = 256/381 (67%), Gaps = 10/381 (3%)
Strand=Plus/Plus
Query 43983 CCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAAGGAC 44042
|||||||||||| || ||| ||||||||||||| |||| ||||||| || | ||
Sbjct 229 CCAAGCGTCGACCTCAGAGCTGTACGGAAAGGTCGCTGAGACACCTCAAAACGAGAAAAC 288
Query 44043 TCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGGATTTGTAA 44102
||| || ||||| ||| ||| |||| | || || || || | || ||||| |
Sbjct 289 TCCTTTCTATCCACGGTCTCCGTATGCTTGCGCAAAACTCTACGGTTACTGGATCGTCAT 348
Query 44103 AAATTATCGCGAGTCGTATGGGATGTTCGTTTGTAATTCGATTTGTTTCAATCACGAAAG 44162
|| || | || |||| | |||| || || ||| ||| ||||| |||| ||
Sbjct 349 CAACTACAGGGAAGCGTACGACATGTACGCGTGCAATGGAATTCTGTTCAACCACG--AG 406
Query 44163 TC-CCAACA-GAGGTCATCAGTTCGTGACTCGTAAAATCACGAAAGCGGTTGCGAATATT 44220
|| || | | | || | | || || ||| | |||||||| | | | || ||||| ||
Sbjct 407 TCACCGAGACGTGGCGAGAATTTTGTTACTAGGAAAATCACCAGAACAGTCGCGAAAATC 466
Query 44221 T---TCAACGGGACAGAAAAATGCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGG 44277
| | || | |||| || | | || | | || ||||| ||||||||| | ||||||
Sbjct 467 TCGCTGAA-GCAACAG-GAAGTAC-TGGAGTTGGGCAACATCGACTCTAAACGTGATTGG 523
Query 44278 GGATATGCCTTGGATTATGTAGAAGCCATGTGGCTGATGTTGCAACAAGACAGGTCAGAC 44337
|| | || || || || || || |||||| |||||||||| | || | ||||
Sbjct 524 GGGCACGCGAGAGACTACGTCGAGGCGATGTGGATGATGTTGCAGCTCGATAAACCAGAA 583
Query 44338 GACTACGTTATTGCAACTGGA 44358
|||| ||| || || ||||||
Sbjct 584 GACTTCGTCATCGCCACTGGA 604
>seq1542
Length=4837
Score = 96.9 bits (106), Expect = 7e-15
Identities = 101/133 (76%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| || || ||||| || || || |||||||| ||||||||||| || || |
Sbjct 1 GATCAATCGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGGATCTTTGCCTTGACATT 60
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| || | ||| || | || || ||||||||||| ||||| || ||||| ||||| ||
Sbjct 61 TTCAATGGAGTCGGAGGGCTCAACCTCGAGAGTGATGGTCTTTCCGGTCAATGTCTTGAC 120
Query 283088 GAATATCTGCATT 283100
||| || ||||||
Sbjct 121 GAAGATTTGCATT 133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046672183504038
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |