Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq29 154 3e-32 seq108 125 1e-23 seq1975 111 3e-19 seq2433 102 2e-16 seq1542 96.9 7e-15 >seq29 Length=258594 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || |||| || | || || ||||||||||||||||| Sbjct 96650 ACCACCACGCAGACGGAGGACCAAGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCT 96591 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || ||||| || | ||| || ||||| |||||||| || || ||||| || Sbjct 96590 CAGAGTACGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGG 96531 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || || ||||| |||||||| || || || | |||||||||||||| | || || Sbjct 96530 AATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTTTCGATAGTGTCCGATGGCTCAAC 96471 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || || ||||||||||| || || ||||| || ||||| Sbjct 96470 CTCGAGGGTAATGGTTTTACCCGTCAATGTTTTGACGAAGATTTGCAT 96423 >seq108 Length=162490 Score = 125 bits (138), Expect = 1e-23 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | || || || || ||||||||||| Sbjct 111836 ACCACCACGAAGACGGAGAACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCT 111895 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | ||||| || || || || || || || || ||||||| ||| || || || || Sbjct 111896 CAATGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGG 111955 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||||||||||||||| || || || | || || |||||||| | ||||| Sbjct 111956 AATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGAC 112015 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCAT 283105 ||||| ||||| ||||| || || | || || ||||| || ||||| || || Sbjct 112016 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCATCTTGAT 112069 >seq1975 Length=2172 Score = 111 bits (122), Expect = 3e-19 Identities = 136/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTC-AGC 282931 || ||||| || ||||| |||| || | || |||||| |||||||||||||| | Sbjct 1987 CCTCCACGGAGACGAAGAACCAAGTGCAGTGTCGATTCTTTCTGGATGTTGTAGTCGCTC 2046 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| ||||| || || || || || ||||||||||| || || ||||| || Sbjct 2047 AAG-GTGCGACCATCTTCGAGCTGCTTTCCAGCAAAGATCAATCGCTGCTGGTCTGGGGG 2105 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||| || ||||||||||| || ||| | || || | ||| || | ||||| Sbjct 2106 GATTCCTTCCTTATCCTGGATCTTTGCCTTAACGTTCTCAATGGAGTCTGATGGCTCGAC 2165 Query 283052 TTC 283054 ||| Sbjct 2166 TTC 2168 >seq2433 Length=1189 Score = 102 bits (112), Expect = 2e-16 Identities = 256/381 (67%), Gaps = 10/381 (3%) Strand=Plus/Plus Query 43983 CCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAAGGAC 44042 |||||||||||| || ||| ||||||||||||| |||| ||||||| || | || Sbjct 229 CCAAGCGTCGACCTCAGAGCTGTACGGAAAGGTCGCTGAGACACCTCAAAACGAGAAAAC 288 Query 44043 TCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGGATTTGTAA 44102 ||| || ||||| ||| ||| |||| | || || || || | || ||||| | Sbjct 289 TCCTTTCTATCCACGGTCTCCGTATGCTTGCGCAAAACTCTACGGTTACTGGATCGTCAT 348 Query 44103 AAATTATCGCGAGTCGTATGGGATGTTCGTTTGTAATTCGATTTGTTTCAATCACGAAAG 44162 || || | || |||| | |||| || || ||| ||| ||||| |||| || Sbjct 349 CAACTACAGGGAAGCGTACGACATGTACGCGTGCAATGGAATTCTGTTCAACCACG--AG 406 Query 44163 TC-CCAACA-GAGGTCATCAGTTCGTGACTCGTAAAATCACGAAAGCGGTTGCGAATATT 44220 || || | | | || | | || || ||| | |||||||| | | | || ||||| || Sbjct 407 TCACCGAGACGTGGCGAGAATTTTGTTACTAGGAAAATCACCAGAACAGTCGCGAAAATC 466 Query 44221 T---TCAACGGGACAGAAAAATGCATGTATCTAGGAAACATAGACTCTAAAAGAGATTGG 44277 | | || | |||| || | | || | | || ||||| ||||||||| | |||||| Sbjct 467 TCGCTGAA-GCAACAG-GAAGTAC-TGGAGTTGGGCAACATCGACTCTAAACGTGATTGG 523 Query 44278 GGATATGCCTTGGATTATGTAGAAGCCATGTGGCTGATGTTGCAACAAGACAGGTCAGAC 44337 || | || || || || || || |||||| |||||||||| | || | |||| Sbjct 524 GGGCACGCGAGAGACTACGTCGAGGCGATGTGGATGATGTTGCAGCTCGATAAACCAGAA 583 Query 44338 GACTACGTTATTGCAACTGGA 44358 |||| ||| || || |||||| Sbjct 584 GACTTCGTCATCGCCACTGGA 604 >seq1542 Length=4837 Score = 96.9 bits (106), Expect = 7e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| || || ||||| || || || |||||||| ||||||||||| || || | Sbjct 1 GATCAATCGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGGATCTTTGCCTTGACATT 60 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || | ||| || | || || ||||||||||| ||||| || ||||| ||||| || Sbjct 61 TTCAATGGAGTCGGAGGGCTCAACCTCGAGAGTGATGGTCTTTCCGGTCAATGTCTTGAC 120 Query 283088 GAATATCTGCATT 283100 ||| || |||||| Sbjct 121 GAAGATTTGCATT 133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046672183504038