Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq29 154 4e-32
seq1975 134 3e-26
seq108 129 1e-24
seq1542 102 2e-16
>seq29
Length=258594
Score = 154 bits (170), Expect = 4e-32
Identities = 158/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| ||||| | || || ||||| || ||||||||||| || || |||
Sbjct 96426 CAAATCTTCGTCAAAACATTGACGGGTAAAACCATTACCCTCGAGGTTGAGCCATCGGAC 96485
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| ||||| |||||||||||||| || || || ||||||||
Sbjct 96486 ACTATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGACCAGCAG 96545
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||| | |||||||||||||| || | ||||||||| | ||||| ||| || ||| ||
Sbjct 96546 CGATTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGTACTCTGAGCGACTACAACATC 96605
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| || || ||||| || ||||
Sbjct 96606 CAAAAGGAGTCGACACTTCA-CTTG 96629
>seq1975
Length=2172
Score = 134 bits (148), Expect = 3e-26
Identities = 125/155 (81%), Gaps = 3/155 (2%)
Strand=Plus/Minus
Query 177978 TCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGAC 178037
|||||| |||| |||||||| || |||||| ||||| || ||||||||||| || |||
Sbjct 2156 TCAGACTCCATTGAGAACGTTAAGGCAAAGATCCAGGATAAGGAAGGAATCCCCCCAGAC 2097
Query 178038 CAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTA 178096
||||| ||| | ||||| || ||||| |||||||||||||| | || |||| ||| ||
Sbjct 2096 CAGCAGCGATTGATCTTTGCTGGAAAGCAGCTCGAAGATGGTCGCAC-CTTGAGCGACTA 2038
Query 178097 TAACGTCCAAAAAGAATCAACACTGCATCTTGTTT 178131
||| |||| |||||||| |||||||| |||| ||
Sbjct 2037 CAACATCCAGAAAGAATCGACACTGCA-CTTGGTT 2004
>seq108
Length=162490
Score = 129 bits (142), Expect = 1e-24
Identities = 154/208 (74%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||||||||| ||||| || || || |||||||||||||| || || |||
Sbjct 112060 CAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGCCATCGGAC 112001
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| ||||| || ||||| ||||| || ||||| || |||||
Sbjct 112000 ACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCAGATCAGCAG 111941
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || ||||| ||||| || | || | ||| || ||| |
Sbjct 111940 CGTCTGATCTTCGCTGGCAAGCAGCTTGAAGACGGTCGCACATTGAGCGACTACAACATT 111881
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
|| || || || ||||| || |||| ||
Sbjct 111880 CAGAAGGAGTCGACACTTCA-CTTGGTT 111854
>seq1542
Length=4837
Score = 102 bits (112), Expect = 2e-16
Identities = 100/129 (78%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || | || ||||| || ||||| |||||||| || ||| |||
Sbjct 129 CAAATCTTCGTCAAGACATTGACCGGAAAGACCATCACTCTCGAGGTTGAGCCCTCCGAC 70
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||| || || ||||| |||||| |||||||| ||||||||||| || ||||||||
Sbjct 69 TCCATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGAATCCCCCCAGACCAGCAG 10
Query 178044 CGACTTATC 178052
||| | |||
Sbjct 9 CGATTGATC 1
Score = 91.5 bits (100), Expect = 4e-13
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || ||||| | ||||| || || |||||||||||||| || ||||||
Sbjct 4727 CAAATCTTTGTCAAAACATTGACAGGCAAGACCATCACCCTCGAGGTTGAGCCATCAGAC 4786
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCC 178033
|||||||| ||||| || ||||| |||||||| |||||||| || ||
Sbjct 4787 ACCATCGAAAACGTTAAGGCTAAGATCCAGGACAAGGAAGGAATTCCCCC 4836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203654132238418
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |