Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq15424 100 6e-16 seq1998 100 6e-16 seq1096 100 6e-16 seq19746 98.7 2e-15 seq2826 98.7 2e-15 seq45 98.7 2e-15 seq29 98.7 2e-15 seq10062 86.0 1e-11 >seq15424 Length=554841 Score = 100 bits (110), Expect = 6e-16 Identities = 72/83 (87%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 165699 TTAAAACGCTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCG 165758 |||| || | ||||| ||||||||||||||||||| | ||||| ||||||| | ||||| Sbjct 445008 TTAACACAGTAGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCG 444949 Query 165759 TGGGTTCGAGCCCCACGATGGGC 165781 ||||||||||||||||| ||||| Sbjct 444948 TGGGTTCGAGCCCCACGTTGGGC 444926 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 435726 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 435667 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 435666 CCCACGTTGGGC 435655 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 436156 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 436215 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 436216 CCCACGTTGGGC 436227 >seq1998 Length=3245398 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 1940195 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 1940254 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 1940255 CCCCACGTTGGGC 1940267 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 1932804 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 1932863 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1932864 CCCACGTTGGGC 1932875 >seq1096 Length=1820125 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 1073710 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 1073769 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 1073770 CCCCACGTTGGGC 1073782 >seq19746 Length=1588519 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 1363053 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 1363112 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1363113 CCCACGTTGGGC 1363124 >seq2826 Length=998508 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 545342 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 545283 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 545282 CCCACGTTGGGC 545271 >seq45 Length=8294487 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 5073450 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 5073509 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 5073510 CCCACGTTGGGC 5073521 >seq29 Length=8431676 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 3068022 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 3067963 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 3067962 CCCACGTTGGGC 3067951 >seq10062 Length=763049 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/181 (71%), Gaps = 8/181 (4%) Strand=Plus/Minus Query 281769 TCTTTACCACCCTGCAGCCTCGACCCAAACTGACCCTCCGGCAACAACCAGTTAATGTTA 281828 |||||||| || |||||||| | ||||||||||| | |||| || ||||||||| Sbjct 442014 TCTTTACCTCCTTGCAGCCTTGTACCAAACTGACCGTTGGGCATTAAGAGATTAATGTTA 441955 Query 281829 TTGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGA----AGCGATACCTC 281884 || || || ||| |||||||| ||| || || || ||| | || | || Sbjct 441954 TTAGAGCCAACAAAATTCTGAGCCAAGTTAACAATGGT----TGAGGTCAATGACATTTC 441899 Query 281885 ACCGTGGTGATAGGCGCTGTGTTCGGCAACATAACCACTGAACTGTGCTACCTTCACGTC 281944 ||| || ||||| || ||||| ||||| ||| |||| || |||||||| ||||| || Sbjct 441898 ACCATGATGATACGCACTGTGCTCGGCTACACTACCAGCTAATTGTGCTACTTTCACTTC 441839 Query 281945 T 281945 | Sbjct 441838 T 441838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057556307389130