Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq105 104 2e-17 >seq105 Length=4822286 Score = 104 bits (114), Expect = 2e-17 Identities = 223/328 (68%), Gaps = 4/328 (1%) Strand=Plus/Plus Query 18786 ACGGGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAA 18845 || || ||| | || || |||| |||||||||||| | || | ||| || || ||||| Sbjct 223963 ACAGGTGACTTGGGTCCTGTTTATGGCTTCCAGTGGCGTCACTATGGTGCCGAGTATAAG 224022 Query 18846 GAC-TGTCAATCAAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATAC 18904 || ||| | || | || | ||||| || || || ||| || || || || || Sbjct 224023 GATATGTTCA-CAGATTACACCAATCAAGGCATTGACCAACTGAAAGAAGTGATCGAAAC 224081 Query 18905 AATTAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATAT 18964 || ||| ||||||| | || || || || || | |||||||||| || | Sbjct 224082 GATCAAATCAAACCCCAATGATCGCCGCATTATAATGTGTGCTTGGAATCCTGTAGACCT 224141 Query 18965 CCCCTTAATGGTACTACCTCCATGTCACA-CGTTATGTCAGTTTTACGTTGCAAACGGTG 19023 || ||||| || ||||| || ||| | || | ||||||||| || || || || | Sbjct 224142 TCCTAAAATGGCCCTGCCTCCTTGCCACTGCCTTGT-TCAGTTTTATGTCGCTAATGGCG 224200 Query 19024 AATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACA 19083 | | || || | | ||||||||||||| | || ||||||||||| || |||||||| Sbjct 224201 AGCTGTCATGTCTATTATACCAGAGATCTGCTGACATGGGCCTTGGTGTGCCGTTCAATG 224260 Query 19084 TTGCTGGATATGCACTTCTTACCTACAT 19111 | || | ||| | || ||||| ||||| Sbjct 224261 TAGCAAGTTATTCGCTACTTACATACAT 224288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399407833269795