Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq105 143 2e-29 >seq105 Length=4822286 Score = 143 bits (158), Expect = 2e-29 Identities = 237/337 (70%), Gaps = 4/337 (1%) Strand=Plus/Minus Query 101747 AGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGC 101806 || ||||||| ||||| |||||| | || | || ||||| || || | || || ||| Sbjct 224309 AGTTTAGTGATGTGAGCGATCATGTATGTAAGTAGCGAATAACTTGCTACATTGAACGGC 224250 Query 101807 ACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAG 101866 || || | ||||| ||||| ||||| || || | | |||| || |||| |||| | | Sbjct 224249 ACACCAAGGCCCATGTCAGCAGATCTCTGGTATAATAGACATGACAGCTCGCCATTAGCG 224190 Query 101867 ACATAAAATTGACTTAATACA-TGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAAC 101925 |||||||| ||| || || || ||||| |||| |||||||||||| |||| | Sbjct 224189 ACATAAAACTGAAC-AAGGCAGTGGCAAGGAGGCAGGGCCATTTTAGGAAGGTCTACAGG 224131 Query 101926 ATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAA 101985 ||||||||||||||||| || | | ||| | ||||||| ||| || || || |||| Sbjct 224130 ATTCCAAGCACACATTATAATGCGGCGATCATTGGGGTTTGATTTGATCGTTTCGATCAC 224071 Query 101986 CTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATC-GCGCCCAACACCTTTATATTCTG 102044 | ||| | |||||||| |||| | ||||| | | | | | | ||||| || | Sbjct 224070 TTCTTTCAGTTGGTCAATGCCTTGATTGGTGTAATCTGTGAAC-ATATCCTTATACTCGG 224012 Query 102045 CTCCGAAATGCCTCCACTGAAATCCATACACAGGTCC 102081 | || | || | |||||| || ||||| ||||| || Sbjct 224011 CACCATAGTGACGCCACTGGAAGCCATAAACAGGACC 223975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361164241304501