Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq105 129 4e-25 >seq105 Length=4822286 Score = 129 bits (142), Expect = 4e-25 Identities = 239/343 (70%), Gaps = 6/343 (2%) Strand=Plus/Minus Query 97116 AGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCC 97175 ||||| || |||||||| | || | ||| ||||| || || | || || ||||| || Sbjct 224304 AGTGATGTGAGCGATCATGTATGTAAGTAGCGAATAACTTGCTACATTGAACGGCACACC 224245 Query 97176 TAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATA 97235 || ||||| ||||| ||||| || ||||| |||| || |||| |||| | ||||| Sbjct 224244 AAGGCCCATGTCAGCAGATCTCTGGTATAATAGACATGACAGCTCGCCATTAGCGACATA 224185 Query 97236 AAACTGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCC 97294 ||||||| ||| || || || || |||| |||||||| |||| |||| ||||| Sbjct 224184 AAACTGAA-CAAGGCAGTGGCAAGGAGGCAGGGCCATTTTAGGAAGGTCTACAGGATTCC 224126 Query 97295 AAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCT 97354 |||||||||| | || | | ||| | ||||||| | || || | || | || || Sbjct 224125 AAGCACACATTATAATGCGGCGATCATTGGGGTTTGATTTGATCGTTTCGATCA-CTTCT 224067 Query 97355 TT-AATTGATCAACGCCTTCTCCACCATAAT-TGTGCTTAAGACCTTGATATTCTGCTCC 97412 || | ||| |||| ||||| |||| |||| | |||| ||| || || || Sbjct 224066 TTCAGTTGGTCAATGCCTTGATTGGTGTAATCTGTGAACATATCCTT-ATACTCGGCACC 224008 Query 97413 AAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCT 97455 | | || | ||| ||||| ||||||||||| || | ||| ||| Sbjct 224007 ATAGTGACGCCACTGGAAGCCATAAACAGGACCCAAGTCACCT 223965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346700523781070