Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq20 129 5e-25 seq933 118 9e-22 seq115 111 1e-19 >seq20 Length=9260020 Score = 129 bits (142), Expect = 5e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| | ||||||| |||||||| | |||||||||||| || |||||||| ||| Sbjct 134705 TACCTCCTCTCAATCTCAGGACCAAGTGAAGTGTAGACTCTTTCTGGATGTTGTAGTCGG 134646 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| | ||| || | ||| ||||| ||| |||| | |||||| || || || | Sbjct 134645 AGAGAGTTCTTCCATCTTCTAACTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGG 134586 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCG 118688 | || || |||||||| |||||| ||||| | || | ||||| | |||| || Sbjct 134585 GAATTCCTTCCTTGTCCTGGATTTTTGCCTTAACATTCTCAATTGTGTCTGATGCT-TCA 134527 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || | ||| | |||||||| ||||| || || |||||||| ||||| Sbjct 134526 ACTTCCAGGGTAATTGTTTTGCCAGTCAGCGTCTTCACAAAAATTTGCAT 134477 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| | ||||||| |||||||| | |||||||||||||| |||||||| ||| Sbjct 134477 TACCTCCTCTCAATCTCAGGACCAAGTGAAGGGTAGACTCTTTTTGGATGTTGTAGTCGG 134418 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| | ||| || | |||||| || ||| |||| | |||||| || || || | Sbjct 134417 AGAGAGTTCTTCCATCTTCTAACTGTTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGGG 134358 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||| |||||||| |||||| || || | || | ||||| | ||| | Sbjct 134357 GAATGCCTTCCTTGTCCTGGATTTTTGCCTTCACATTCTCAATTGTGTCTGAAGCCTCAA 134298 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 | |||| ||| | ||||| || || | || || ||||||||||||||| Sbjct 134297 CTTCGAGGGTGATGGTTTTCCCTGTTAAGGTCTTGACAAAAATCTGCATG 134248 >seq933 Length=6104033 Score = 118 bits (130), Expect = 9e-22 Identities = 166/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | ||| | || || || | || || ||||||||||||||||| | | Sbjct 5593490 TACCACCACGCAGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGT--C 5593547 Query 118570 TCATA--GTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGG 118627 | ||| ||||| ||| || | ||||| |||||| |||||||||| ||||| || || Sbjct 5593548 TGATAAGGTGCGGCCATCTTCTAATTGTTTACCAGCGAAGATGAGACGTTGCTGGTCTGG 5593607 Query 118628 AGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTC 118687 ||| || || ||||||||| ||| || ||||| | ||| | ||| || | | ||| Sbjct 5593608 AGGGATACCTTCCTTGTCTTGAATCTTAGCCTTAACATTTTCAATGGTATCGGAGGCCTC 5593667 Query 118688 GACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || | ||| | ||||| || || || || || |||||||| ||||| Sbjct 5593668 AACTTCCAAGGTGATGGTTTTCCCTGTGAGGGTCTTGACAAAAATTTGCAT 5593718 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || || | || ||| || ||||||| || || ||||||||||||||||| ||| Sbjct 5591440 CCACCACGAAGTCGCAAAACTAAGTGGAGAGTGGATTCTTTTTGAATGTTGTAGTCGGAT 5591499 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||||| ||| || | ||||| |||||| |||||||||| ||||| || ||||| Sbjct 5591500 AGGGTGCGGCCATCTTCCAATTGTTTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGG 5591559 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGAC 118690 || || ||||||||| || || || || | |||| |||||| | ||| || || Sbjct 5591560 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAAGCT-TCTAC 5591618 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| | ||| | || || || || || || || || ||||| ||||| Sbjct 5591619 CTCCAAGGTGATAGTCTTTCCTGTGAGGGTCTTGACGAAAATTTGCAT 5591666 Score = 114 bits (126), Expect = 1e-20 Identities = 153/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATA--GTGCGCGTATCCT 118587 || || |||| || || ||||||||||||||||| | || ||| ||||| ||| | Sbjct 5593054 ACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGT--CTGATAAGGTGCGGCCATCTT 5593111 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 | | ||||| |||||| |||||||||| ||||| || ||||| || || ||||||||| Sbjct 5593112 CTAATTGTTTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCTT 5593171 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 ||| || ||||| | ||| | ||| || | | ||| || || | ||| | || | Sbjct 5593172 GAATCTTAGCCTTAACATTTTCAATGGTATCGGAGGCCTCAACTTCCAAGGTGATGGTCT 5593231 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || || || || || |||||||| ||||| Sbjct 5593232 TTCCAGTGAGGGTCTTGACAAAAATTTGCAT 5593262 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 || || |||| ||||| || || || ||||||||||| | ||| || ||| || Sbjct 5592370 ACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTACGGCCATCTTCC 5592429 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || ||||| |||||| |||||||||| ||||| || ||||| || || ||||||||| Sbjct 5592430 AGTTGTTTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGG 5592489 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || ||||| | |||| |||||| | ||| || || | ||| | ||||| Sbjct 5592490 ATCTTGGCCTTAACATTCTCGATGGTGTCAGAAGCCTCAACTTCCAAGGTGATGGTTTTT 5592549 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || ||||| || || ||||| ||||| Sbjct 5592550 CCTGTGAGAGTCTTGACGAAAATTTGCAT 5592578 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 || || |||| ||||| || || || ||||||||||| | ||| || ||| || Sbjct 5592598 ACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTACGGCCATCTTCC 5592657 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || ||||| |||||| |||||||||| ||||| || ||||| || || ||||||||| Sbjct 5592658 AGTTGTTTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGG 5592717 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || ||||| | |||| |||||| | ||| || || | ||| | ||||| Sbjct 5592718 ATCTTGGCCTTAACATTCTCGATGGTGTCAGAAGCCTCAACTTCCAAGGTAATGGTTTTT 5592777 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || ||||| || || ||||| ||||| Sbjct 5592778 CCTGTGAGAGTCTTGACGAAAATTTGCAT 5592806 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 || || |||| ||||| || || || |||||||| || | |||||| ||| || Sbjct 5591914 ACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCTGATAGAGTGCGGCCATCTTCT 5591973 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | || || |||||| |||||||||||||||| || ||||| || || ||||||||| Sbjct 5591974 AATTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGG 5592033 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || ||||| | ||||| |||||| | ||| || || | ||| | || || Sbjct 5592034 ATCTTGGCCTTAACATTTTCGATGGTGTCGGAAGCCTCAACTTCCAAGGTGATAGTCTTT 5592093 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || || ||||| ||||| Sbjct 5592094 CCTGTGAGGGTCTTGACGAAAATTTGCAT 5592122 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | ||| | || || || | || || ||||||||||||||||| ||| Sbjct 5593262 TACCACCACGCAGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCGG 5593321 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| ||| || | ||||| || ||| |||||||||| ||||| || |||| Sbjct 5593322 ATAAGGTGCGGCCATCTTCTAATTGTTTACCGGCGAAGATGAGACGTTGCTGGTCTGGAG 5593381 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||||||| || || || || | |||| |||||| | | || | Sbjct 5593382 GGATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAGGCTTCTA 5593441 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || || || || || || || || ||||| ||||| Sbjct 5593442 CCTCCAAGGTGATGGTCTTTCCTGTGAGGGTCTTGACGAAAATTTGCAT 5593490 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | ||| | || || || | || || ||||||||||||||||| ||| Sbjct 5593718 TACCACCACGCAGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCGG 5593777 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| ||| || | ||||| || ||| |||||||||| ||||| || |||| Sbjct 5593778 ATAAGGTGCGGCCATCTTCTAATTGTTTACCGGCGAAGATGAGACGTTGCTGGTCTGGAG 5593837 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||||||| || || || || | ||||| |||||| | ||| | Sbjct 5593838 GGATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCGATGGTGTCGGAAGCCTCAA 5593897 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | || || || || || || || |||||||| ||||| Sbjct 5593898 CTTCCAAAGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAAATTTGCAT 5593946 Score = 100 bits (110), Expect = 2e-16 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || | ||| | || || || | || || ||||||||||||||||||| | Sbjct 5591666 TACCACCACGCAGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAAT--C 5591723 Query 118570 TCATA--GTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGG 118627 | ||| ||||| ||| || | ||||| |||||| |||||||||| ||||| || || Sbjct 5591724 TGATAAGGTGCGGCCATCTTCCAATTGTTTACCAGCGAAGATGAGACGTTGCTGGTCCGG 5591783 Query 118628 AGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTC 118687 ||| || || ||||||||| || || || || | || | ||| || | | ||| Sbjct 5591784 AGGGATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTATCGGAGGCCTC 5591843 Query 118688 GACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || | ||| | || || || || || || || || ||||| ||||| Sbjct 5591844 AACTTCCAAGGTGATGGTCTTTCCAGTAAGGGTCTTGACGAAAATTTGCAT 5591894 >seq115 Length=3414097 Score = 111 bits (122), Expect = 1e-19 Identities = 143/193 (74%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 118549 CTTTTTGAATGTTGTAATCGCTCATA--GTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 |||| ||||||||||||| || ||| |||||| ||| || | ||||| || || | Sbjct 442547 CTTTCTGAATGTTGTAAT--CTGATAGTGTGCGCCCATCTTCCAATTGTTTGCCTGCAAA 442604 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 || | | |||||| || ||||| ||||| || |||||| |||||| ||| || | Sbjct 442605 AATCAATCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCTTGAATTTTGCTTTTGACATT 442664 Query 118667 TTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 118725 ||||| ||||| | ||| ||| || || | || | |||||||| |||| |||||| | Sbjct 442665 TTCGATAGTGTCTGATGC-CTCTACTTCAAGAGTGATTGTTTTGCCAGTCAAAGTTTTAA 442723 Query 118726 CAAAAATCTGCAT 118738 ||||||||||||| Sbjct 442724 CAAAAATCTGCAT 442736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433725970379692