Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq115 98.7 1e-15 >seq115 Length=3414097 Score = 98.7 bits (108), Expect = 1e-15 Identities = 126/182 (69%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 || || |||||||| || || | | ||| || |||||||| || |||||||||||||| Sbjct 442555 ATGTTGTAATCTGATAGTGTGCGCCCATCTTCCAATTGTTTGCCTGCAAAAATCAATCTC 442614 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTA 146215 ||||| || |||||||| |||||||| ||||| ||| Sbjct 442615 TGCTGGTCAGGAGGAATGCCTTCTTTGTCTTGAATTTTGCTTTTGACATTTTCGATAGTG 442674 Query 146216 TCTGAACTTTCTACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGC 146275 ||||| |||||||| || ||||||||||| || || || ||||||| || || ||| Sbjct 442675 TCTGATGCCTCTACTTCAAGAGTGATTGTTTTGCCAGTCAAAGTTTTAACAAAAATCTGC 442734 Query 146276 AT 146277 || Sbjct 442735 AT 442736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743342832625920