Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq105 116 3e-21 >seq105 Length=4822286 Score = 116 bits (128), Expect = 3e-21 Identities = 227/333 (68%), Gaps = 2/333 (1%) Strand=Plus/Plus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || || ||||||||||| ||||| || || ||| | || | ||| || || ||| || Sbjct 223966 GGTGACTTGGGTCCTGTTTATGGCTTCCAGTGGCGTCACTATGGTGCCGAGTATAAGGAT 224025 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 ||| |||| |||| ||||| | || ||| | || | || || | || Sbjct 224026 ATGTTCACAGATTACACCAATCAAGGCATTGACCAACTGAAAGAAGTGATCGAAACGATC 224085 Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCT 20397 ||| | ||||| || || | | ||||| | || || ||||| || ||| | ||| Sbjct 224086 AAATCAAACCCCAATGATCGCCGCATTATAATGTGTGCTTGGAATCCTGTAGACCTTCCT 224145 Query 20398 TTAATGGCTTTGCCTCCATGTCATATGCTATG-CCAATTTTACGTTGCTAATAATGAATT 20456 |||||| ||||||| || || ||| || || ||||| || |||||| || | Sbjct 224146 AAAATGGCCCTGCCTCCTTGCCA-CTGCCTTGTTCAGTTTTATGTCGCTAATGGCGAGCT 224204 Query 20457 GTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGC 20516 ||| |||| | | || || |||| ||||| ||||| || ||||| || |||||| | || Sbjct 224205 GTCATGTCTATTATACCAGAGATCTGCTGACATGGGCCTTGGTGTGCCGTTCAATGTAGC 224264 Query 20517 AAGTTATGCGCTGCTTACGTATATGATTGCACA 20549 ||||||| |||| ||||| || ||||| || || Sbjct 224265 AAGTTATTCGCTACTTACATACATGATCGCTCA 224297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399087910298695