Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq20 131 1e-25 seq933 96.9 3e-15 >seq20 Length=9260020 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || ||||||||||| | |||||||| || || ||| ||||| |||||||||||| Sbjct 134703 CCTCCTCTCAATCTCAGGACCAAGTGAAGTGTAGACTCTTTCTGGATGTTGTAGTCGGAG 134644 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || | | || || | || ||||||||||| ||||| ||||||||||| || || Sbjct 134643 AGAGTTCTTCCATCTTCTAACTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGA 134584 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||||||| |||||| |||||| | | | |||| | || || Sbjct 134583 ATTCCTTCCTTGTCCTGGATTTTTGCCTTAACATTCTCAATTGTGTCTGATGCTTCAACT 134524 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| |||||| || ||||| ||||| ||||||||||| |||||||| Sbjct 134523 TCCAGGGTAATTGTTTTGCCAGTCAGCGTCTTCACAAAAATTTGCAT 134477 Score = 102 bits (112), Expect = 6e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || ||||||||||| | |||||||| || || ||| || || |||||||||||| Sbjct 134475 CCTCCTCTCAATCTCAGGACCAAGTGAAGGGTAGACTCTTTTTGGATGTTGTAGTCGGAG 134416 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || | | || || | ||||| |||||||| ||||| ||||||||||| || || Sbjct 134415 AGAGTTCTTCCATCTTCTAACTGTTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGA 134356 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||||||| |||||| ||| || | | | |||| | |||| || Sbjct 134355 ATGCCTTCCTTGTCCTGGATTTTTGCCTTCACATTCTCAATTGTGTCTGAAGCCTCAACT 134296 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 || | ||| || || || || || | ||||| ||||| || |||||| || Sbjct 134295 TCGAGGGTGATGGTTTTCCCTGTTAAGGTCTTGACAAAAATCTGCATGATG 134245 >seq933 Length=6104033 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| | | || || || ||||| || ||| || || ||||||||||||||| Sbjct 5591439 GCCACCACGAAGTCGCAAAACTAAGTGGAGAGTGGATTCTTTTTGAATGTTGTAGTCGGA 5591498 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| | || |||| |||||| || ||||| || | || || ||||| ||||| Sbjct 5591499 TAGGGTGCGGCCATCTTCCAATTGTTTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGG 5591558 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | ||| |||||||| || || ||| || | | | | |||| | | || || Sbjct 5591559 GATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAAGCTTCTAC 5591618 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| ||| || ||||| || || || ||||| || || |||||||| Sbjct 5591619 CTCCAAGGTGATAGTCTTTCCTGTGAGGGTCTTGACGAAAATTTGCAT 5591666 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| |||||||| || || || | || ||||||||||| || ||||| Sbjct 5592616 TCCTTCTGGATGTTGTAATCAGAAAGAGTACGGCCATCTTCCAGTTGTTTACCAGCGAAG 5592675 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 || | || || ||||| ||||| | ||| |||||||| || || |||||| | Sbjct 5592676 ATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGGATCTTGGCCTTAACATTC 5592735 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | |||| || |||| |||||| || || || || |||||||| || Sbjct 5592736 TCGATGGTGTCAGAAGCCTCAACTTCCAAGGTAATGGTTTTTCCTGTGAGAGTCTTGACG 5592795 Query 45326 AAGATTTGCAT 45336 || |||||||| Sbjct 5592796 AAAATTTGCAT 5592806 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| |||||||| || || || | || ||||||||||| || ||||| Sbjct 5592388 TCCTTCTGGATGTTGTAATCAGAAAGAGTACGGCCATCTTCCAGTTGTTTACCAGCGAAG 5592447 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 || | || || ||||| ||||| | ||| |||||||| || || |||||| | Sbjct 5592448 ATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGGATCTTGGCCTTAACATTC 5592507 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | |||| || |||| ||| || || || || || |||||||| || Sbjct 5592508 TCGATGGTGTCAGAAGCCTCAACTTCCAAGGTGATGGTTTTTCCTGTGAGAGTCTTGACG 5592567 Query 45326 AAGATTTGCAT 45336 || |||||||| Sbjct 5592568 AAAATTTGCAT 5592578 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| ||||||||||| || ||| | || || | ||| || || ||||| Sbjct 5591932 TCCTTCTGGATGTTGTAGTCTGATAGAGTGCGGCCATCTTCTAATTGCTTACCAGCGAAG 5591991 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 || | ||||| ||||| ||||| | ||| |||||||| || || |||||| Sbjct 5591992 ATGAGACGCTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGGATCTTGGCCTTAACATTT 5592051 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| | |||| || |||| ||| || ||||| || || || ||||| || Sbjct 5592052 TCGATGGTGTCGGAAGCCTCAACTTCCAAGGTGATAGTCTTTCCTGTGAGGGTCTTGACG 5592111 Query 45326 AAGATTTGCAT 45336 || |||||||| Sbjct 5592112 AAAATTTGCAT 5592122 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTT 45168 ||||| | || ||| | || || || || || || || |||||||||||||| | | Sbjct 5593264 CCACCACGCAGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCGGAT 5593323 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || | ||| | || || | |||||| |||||||| || | || || ||||| ||||| Sbjct 5593324 AAGGT-GCGGCCATCTTCTAATTGTTTACCGGCGAAGATGAGACGTTGCTGGTCTGGAGG 5593382 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | ||| |||||||| || || ||| || | | | | |||| | || || Sbjct 5593383 GATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAGGCTTCTAC 5593442 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| ||| || ||||| || || || ||||| || || |||||||| Sbjct 5593443 CTCCAAGGTGATGGTCTTTCCTGTGAGGGTCTTGACGAAAATTTGCAT 5593490 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTT 45168 ||||| | || ||| | || || || || || || || |||||||||||||| | | Sbjct 5593720 CCACCACGCAGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCGGAT 5593779 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || | ||| | || || | |||||| |||||||| || | || || ||||| ||||| Sbjct 5593780 AAGGT-GCGGCCATCTTCTAATTGTTTACCGGCGAAGATGAGACGTTGCTGGTCTGGAGG 5593838 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | ||| |||||||| || || ||| || | | | |||| | |||| || Sbjct 5593839 GATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCGATGGTGTCGGAAGCCTCAAC 5593898 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| || || ||||| || || || ||||| ||||| |||||||| Sbjct 5593899 TTCCAAAGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAAATTTGCAT 5593946 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTC-GTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 || || |||||||||||||| | | || | ||| | || || | |||||| || ||||| Sbjct 5593072 TCTTTTTGAATGTTGTAGTCTGATAAGGT-GCGGCCATCTTCTAATTGTTTACCAGCGAA 5593130 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | || || ||||| ||||| | ||| |||||||| ||| || |||||| Sbjct 5593131 GATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGAATCTTAGCCTTAACATT 5593190 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | | || |||| || |||| ||| || ||||| || || || ||||| || Sbjct 5593191 TTCAATGGTATCGGAGGCCTCAACTTCCAAGGTGATGGTCTTTCCAGTGAGGGTCTTGAC 5593250 Query 45325 AAAGATTTGCAT 45336 ||| |||||||| Sbjct 5593251 AAAAATTTGCAT 5593262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394980099349771