Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq20 107 2e-18 seq115 89.7 4e-13 >seq20 Length=9260020 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 24826 AACATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAA 24885 |||||||||||||| ||||| || |||||||| || ||||| || ||| |||| || || Sbjct 134243 AACATCATGCAGATTTTTGTCAAGACCTTAACAGGGAAAACCATCACCCTCGAAGTTGAG 134302 Query 24886 TCGAGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTT 24945 | |||| | || | ||| |||| |||||| | || |||||| | || | Sbjct 134303 GCTTCAGACACAATTGAGAATGTGAAGGCAAAAATCCAGGACAAGGAAGGCATTCCCCCT 134362 Query 24946 GACCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGAT 25005 ||||| || ||||| || | || |||||||| | |||||| | ||| | ||| Sbjct 134363 GACCAACAGCGTTTGATCTTCGCCGGCAAACAGTTAGAAGATGGAAGAACTCTCTCCGAC 134422 Query 25006 TACAGCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 |||| ||| || |||||| | || ||||| || || | ||||| | |||||| Sbjct 134423 TACAACATCCAAAAAGAGTCTACCCTTCACTTGGTCCTGAGATTGAGAGGAGGT 134476 >seq115 Length=3414097 Score = 89.7 bits (98), Expect = 4e-13 Identities = 136/192 (71%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||||||||| || || |||||||| || || | || || || | Sbjct 442736 ATGCAGATTTTTGTTAAAACTTTGACTGGCAAAACAATCACTCTTGAAGTAGAGGCATCA 442677 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | | |||| ||| || |||||| | ||||||||| | || ||||||| Sbjct 442676 GACACTATCGAAAATGTCAAAAGCAAAATTCAAGACAAAGAAGGCATTCCTCCTGACCAG 442617 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGAT--TCCATGACTATGAACGATTACA 25009 || | || || | ||| ||||||||| |||||||| | ||||| | ||||||| Sbjct 442616 CAGAGATTGATTTTTGCAGGCAAACAATTGGAAGATGGGCGCACACTATCA--GATTACA 442559 Query 25010 GCATACAGAAAG 25021 ||| ||||||| Sbjct 442558 ACATTCAGAAAG 442547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418203307821920