Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq105 111 1e-19 >seq105 Length=4822286 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 20997 GTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCG 21056 |||| ||||||||||| || || || || | || || || | || ||||| || || Sbjct 224303 GTGATGTGAGCGATCATGTATGTAAGTAGCGAATAACTTGCTACATTGAACGGCACACCA 224244 Query 21057 AGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAA 21116 ||||||||||| || || |||||||| | | || |||||||| || ||| || ||| Sbjct 224243 AGGCCCATGTCAGCAGATCTCTGGTATAATAGACATGACAGCTCGCCATTAGCGACATAA 224184 Query 21117 AACTGACACAAAAC-GTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCA 21175 |||||| |||| | ||| |||||||| || ||||| | ||||| | || ||||| Sbjct 224183 AACTGA-ACAAGGCAGTGGCAAGGAGGCAGGGCCATTTTAGGAAGGTCTACAGGATTCCA 224125 Query 21176 CGCGCACATAACGATGCGCCGATCGTGGGG 21205 || ||||| | ||||| ||||| | ||| Sbjct 224124 AGCACACATTATAATGCGGCGATCATTGGG 224095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427673027766480