Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq10062 116 4e-21 >seq10062 Length=763049 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 14141 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTG 14200 |||||| || || || ||||| ||||||||||||||||| | || ||||| ||||| || Sbjct 235920 AATGTAAGTGTCGATGAGTAAACTATACATTTCAGAGTGGACATTCTCCATTGCTATTTG 235979 Query 14201 AAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTC-CGAGTAAAATCTTTCGGCCA 14259 || ||||| || || | ||||||| ||| || || || | |||||||| ||| Sbjct 235980 GAAGCCATAGAAACAACGTGCTTCCGTTACTTGAACCTCTTGACT-GAATCTTTCTACCA 236038 Query 14260 AATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGT 14319 ||||||||||| |||||||| || ||||||||||| | || | |||||| | Sbjct 236039 GGTTTTCATTAACGATACCATCCGAGGCAGCAAAAAATGCAAGTACATGCGAAATAAAAT 236098 Query 14320 ATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAA 14367 || ||| || || | ||||| |||||| | | ||||| | ||| Sbjct 236099 GTTTCTCGTCCGGTTTTAATTTTTCCCAATCTGCAAGATCCTGAAAAA 236146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479609561153400