Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq105 100 4e-16 >seq105 Length=4822286 Score = 100 bits (110), Expect = 4e-16 Identities = 224/333 (67%), Gaps = 4/333 (1%) Strand=Plus/Plus Query 70074 TGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCGAGA 70133 |||| || || || || ||||||||| | |||| || || ||||| || | Sbjct 223973 TGGGTCCTGTTTATGGCTTCCAGTGGCGTCACTATGGTGCCGAGTATAAGGATATGTTCA 224032 Query 70134 CAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAGACCA 70193 |||| || | ||| || |||| ||| || | | | || || || |||| | | Sbjct 224033 CAGATTACACCAATCAAGGCATTGACCAACTGAAAGAAGTGATCGAAACGATCAAATCAA 224092 Query 70194 ATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGG 70253 | || | ||| | | || ||||||| | |||||||||| ||| | | |||||| Sbjct 224093 ACCCCAATGATCGCCGCATTATAATGTGTGCTTGGAATCCTGTAGACCTTCCTAAAATGG 224152 Query 70254 CACTACCACCGTGTCACTGTTTGGCTCAGTTTTAC-TCG-TACGATGGCAAATTGTCATG 70311 | || || || || ||||| | | ||||||||| ||| || ||||| | ||||||| Sbjct 224153 CCCTGCCTCCTTGCCACTGCCTTGTTCAGTTTTATGTCGCTA--ATGGCGAGCTGTCATG 224210 Query 70312 CTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTA 70371 || | || ||||| ||| ||||||||||| ||||| || || || | ||||| || Sbjct 224211 TCTATTATACCAGAGATCTGCTGACATGGGCCTTGGTGTGCCGTTCAATGTAGCAAGTTA 224270 Query 70372 TTCTATGTTGACGCACATGATTGCTCACATTAC 70404 ||| | | || ||||||| |||||||| || Sbjct 224271 TTCGCTACTTACATACATGATCGCTCACATCAC 224303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740876241746760