Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq933 91.5 9e-14 >seq933 Length=6104033 Score = 91.5 bits (100), Expect = 9e-14 Identities = 148/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 || ||||| | || || |||||||| || |||||||| || || || | || ||| Sbjct 5591686 ACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAATCTGATAAGGTGCGGCCATCTTCC 5591745 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTCG 33277 ||||| || ||| || || | |||||||||||||| || || ||||| || || | Sbjct 5591746 AATTGTTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGGGATACCTTCCTTGTCTTGG 5591805 Query 33278 CTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337 | | ||| || || | | ||| || ||| || | ||| |||| || || || Sbjct 5591806 ATCTTGGCC---TTGACATTCTCAATGGTATCGGAGGCCTCAACTTCCAAGGTGATGGTC 5591862 Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||||| ||||| || || |||||||||||||| Sbjct 5591863 TTTCCAGTAAGGGTCTTGACGAAAATTTGCAT 5591894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318700865350398