Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq15424 102 2e-16 seq2826 100 6e-16 seq1998 100 6e-16 seq45 100 6e-16 seq19746 98.7 2e-15 seq1096 98.7 2e-15 seq29 98.7 2e-15 seq10534 89.7 1e-12 seq420 87.8 4e-12 seq20 86.0 1e-11 seq6820 84.2 4e-11 >seq15424 Length=554841 Score = 102 bits (112), Expect = 2e-16 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||| Sbjct 444999 TAGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGA 444940 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 444939 GCCCCACGTTGGGC 444926 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 435727 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 435668 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 435667 CCCCACGTTGGGC 435655 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 436155 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 436214 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 436215 CCCCACGTTGGGC 436227 >seq2826 Length=998508 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 545343 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 545284 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 545283 CCCCACGTTGGGC 545271 >seq1998 Length=3245398 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 1932803 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 1932862 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 1932863 CCCCACGTTGGGC 1932875 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||||| Sbjct 1940196 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 1940255 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 1940256 CCCACGTTGGGC 1940267 >seq45 Length=8294487 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| | ||||||||||||| | ||||||||||||||| Sbjct 5073449 AGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 5073508 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 5073509 CCCCACGTTGGGC 5073521 >seq19746 Length=1588519 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||||| Sbjct 1363053 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 1363112 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 1363113 CCCACGTTGGGC 1363124 >seq1096 Length=1820125 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||||| Sbjct 1073711 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 1073770 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 1073771 CCCACGTTGGGC 1073782 >seq29 Length=8431676 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| | ||||||||||||| | |||||||||||||||| Sbjct 3068022 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 3067963 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 3067962 CCCACGTTGGGC 3067951 >seq10534 Length=11178615 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| |||| ||||||||||||||||||||||||||| | |||||||| | Sbjct 304725 GTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 304666 Query 142113 CCCGCCAGAGACGC 142126 ||| |||| || || Sbjct 304665 CCCACCAGGGATGC 304652 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| |||| ||||||||||||||||||||||||||| | |||||||| | Sbjct 316147 GTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 316088 Query 142113 CCCGCCAGAGACGC 142126 ||| |||| || || Sbjct 316087 CCCACCAGGGATGC 316074 >seq420 Length=3728946 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| |||| ||||||||||||||||||||||||||| | |||||||| | Sbjct 3561392 GTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 3561333 Query 142113 CCCGCCAGAGA 142123 ||| |||| || Sbjct 3561332 CCCACCAGGGA 3561322 >seq20 Length=9260020 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142052 TGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 |||| |||| ||||| |||| ||||||||||||||||||| ||||||| | |||||||| Sbjct 5266369 TGTCCCTGTAGCGCAGTGGATAGCGCGTTGGACTTCTAATTCAAAGGTCGTGGGTTCGAT 5266428 Query 142112 CCCCGCCAGAGACGC 142126 |||| |||| || || Sbjct 5266429 CCCCACCAGGGATGC 5266443 >seq6820 Length=3932188 Score = 84.2 bits (92), Expect = 4e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112 ||| |||| ||||| ||| ||||||||||||||||||||||||||| | |||||||| | Sbjct 1600916 GTCCCTGTAGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCGATC 1600857 Query 142113 CCCGCCAGAGA 142123 ||| |||| || Sbjct 1600856 CCCACCAGGGA 1600846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027576695940591