Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq933 145 8e-30 seq115 125 7e-24 seq20 109 5e-19 >seq933 Length=6104033 Score = 145 bits (160), Expect = 8e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| ||| || |||| ||||| || ||||||||||||||||||||||||| Sbjct 5591667 ACCACCACGCAGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAATCTGA 5591726 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | ||||| | || || || || | ||||| || |||||||| ||||| Sbjct 5591727 TAAGGTGCGGCCATCTTCCAATTGTTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGG 5591786 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || ||||| || || ||| ||| ||| | ||||| ||| || || Sbjct 5591787 GATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTATCGGAGGCCTCAAC 5591846 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | |||||| || || | || || |||||||||||||| Sbjct 5591847 TTCCAAGGTGATGGTCTTTCCAGTAAGGGTCTTGACGAAAATTTGCAT 5591894 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| ||| || |||| ||||| || |||||||||||||||||||| || | Sbjct 5593263 ACCACCACGCAGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCGGA 5593322 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | ||||| | || || ||||| | ||||| || |||||||| ||||| Sbjct 5593323 TAAGGTGCGGCCATCTTCTAATTGTTTACCGGCGAAGATGAGACGTTGCTGGTCTGGAGG 5593382 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || ||||| || || ||| ||| ||| | || ||| ||| || || Sbjct 5593383 GATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAGGCTTCTAC 5593442 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||| || || | || || |||||||||||||| Sbjct 5593443 CTCCAAGGTGATGGTCTTTCCTGTGAGGGTCTTGACGAAAATTTGCAT 5593490 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| ||| || |||| ||| | || ||||| || || |||||||| |||| Sbjct 5592123 ACCACCACGCAGTCTGAGAACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCTGA 5592182 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | ||||| | ||||| || || | ||||| || |||||||| ||||| Sbjct 5592183 TAGAGTGCGGCCATCTTCTAATTGCTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGG 5592242 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || ||||| || || ||| ||| ||| | |||||| ||| || || Sbjct 5592243 GATACCTTCCTTGTCTTGGATCTTGGCCTTAACATTCTCGATAGTATCAGAGGCCTCTAC 5592302 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | ||| || || || | ||| || |||||||||||||| Sbjct 5592303 TTCCAAGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAAATTTGCAT 5592350 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| ||| || |||| ||||| || |||||||||||||||||||| |||| Sbjct 5593491 ACCACCACGCAGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCTGA 5593550 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | ||||| | || || || || | ||||| || |||||||| ||||| Sbjct 5593551 TAAGGTGCGGCCATCTTCTAATTGTTTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGG 5593610 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || ||||| || || ||| ||| || | ||||| ||| || || Sbjct 5593611 GATACCTTCCTTGTCTTGAATCTTAGCCTTAACATTTTCAATGGTATCGGAGGCCTCAAC 5593670 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | ||| || || || | || || || ||||||||||| Sbjct 5593671 TTCCAAGGTGATGGTTTTCCCTGTGAGGGTCTTGACAAAAATTTGCAT 5593718 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| ||| || |||| ||||| || |||||||||||||||||||| || | Sbjct 5593719 ACCACCACGCAGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCGGA 5593778 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | ||||| | || || ||||| | ||||| || |||||||| ||||| Sbjct 5593779 TAAGGTGCGGCCATCTTCTAATTGTTTACCGGCGAAGATGAGACGTTGCTGGTCTGGAGG 5593838 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || ||||| || ||||| || || ||| ||| || | || || || || || Sbjct 5593839 GATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCGATGGTGTCGGAAGCCTCAAC 5593898 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||| | |||||| || || | || || || ||||||||||| Sbjct 5593899 TTCCAAAGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAAATTTGCAT 5593946 Score = 116 bits (128), Expect = 4e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || |||| ||| | || |||||||||||||||||||| |||| | |||||| | ||| Sbjct 5593051 AGAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCTGATAAGGTGCGGCCATCT 5593110 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | || || || || | ||||| || |||||||| ||||| || ||||| || ||| Sbjct 5593111 TCTAATTGTTTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCT 5593170 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | ||||| ||| || ||||| | || | |||| Sbjct 5593171 TGAATCTTAGCCTTAACATTTTCAATGGTATCGGAGGCCTCAACTTCCAAGGTGATGGTC 5593230 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || | || || || ||||||||||| Sbjct 5593231 TTTCCAGTGAGGGTCTTGACAAAAATTTGCAT 5593262 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || |||||||||||||||||||| || | | |||||| | ||||| | || || || Sbjct 5591470 GTGGATTCTTTTTGAATGTTGTAGTCGGATAGGGTGCGGCCATCTTCCAATTGTTTACCA 5591529 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| || |||||||| ||||| || ||||| || ||||| || || ||| Sbjct 5591530 GCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGGATCTTGGCCTTG 5591589 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| ||| | || ||| || || || || | || | ||||| || || | || Sbjct 5591590 ACATTCTCGATGGTGTCAGAAGCTTCTACCTCCAAGGTGATAGTCTTTCCTGTGAGGGTC 5591649 Query 64427 TTTACGAAAATTTGCAT 64443 || |||||||||||||| Sbjct 5591650 TTGACGAAAATTTGCAT 5591666 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || |||| ||| | || ||||| || || ||||||||||| | | || || | ||| Sbjct 5592367 AGAACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTACGGCCATCT 5592426 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || || || || || | ||||| || |||||||| ||||| || ||||| || ||| Sbjct 5592427 TCCAGTTGTTTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCT 5592486 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| ||| | || ||| || || ||||| | || | ||| Sbjct 5592487 TGGATCTTGGCCTTAACATTCTCGATGGTGTCAGAAGCCTCAACTTCCAAGGTGATGGTT 5592546 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || | ||| || |||||||||||||| Sbjct 5592547 TTTCCTGTGAGAGTCTTGACGAAAATTTGCAT 5592578 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || |||| ||| | || ||||| || || ||||||||||| | | || || | ||| Sbjct 5592595 AGAACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTACGGCCATCT 5592654 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || || || || || | ||||| || |||||||| ||||| || ||||| || ||| Sbjct 5592655 TCCAGTTGTTTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCT 5592714 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| ||| | || ||| || || ||||| | || | ||| Sbjct 5592715 TGGATCTTGGCCTTAACATTCTCGATGGTGTCAGAAGCCTCAACTTCCAAGGTAATGGTT 5592774 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || | ||| || |||||||||||||| Sbjct 5592775 TTTCCTGTGAGAGTCTTGACGAAAATTTGCAT 5592806 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || |||| ||| | || ||||| || || ||||| ||||| | | ||| || | ||| Sbjct 5592823 AGAACTAAATGGAGAGTAGATTCCTTCTGGATGTTATAATCAGAAAGGGTACGGCCATCT 5592882 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || || || || || | ||||| || |||||||| ||||| || ||||| || ||| Sbjct 5592883 TCCAGTTGTTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGGGATACCTTCCTTGTCT 5592942 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| ||| | ||||| ||| || ||||| | || | |||| Sbjct 5592943 TGGATCTTGGCCTTGACATTCTCGATGGTATCGGAGGCCTCGACTTCCAAGGTGATGGTC 5593002 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || | || || || ||||||||||| Sbjct 5593003 TTTCCTGTGAGGGTCTTGACAAAAATTTGCAT 5593034 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || |||| ||| | || ||||| || || |||||||| |||| | ||||| | ||| Sbjct 5591911 AGAACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCTGATAGAGTGCGGCCATCT 5591970 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | ||||| || || | ||||| ||||||||||| ||||| || ||||| || ||| Sbjct 5591971 TCTAATTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATACCTTCCTTGTCT 5592030 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || || || || ||||| | || | ||| Sbjct 5592031 TGGATCTTGGCCTTAACATTTTCGATGGTGTCGGAAGCCTCAACTTCCAAGGTGATAGTC 5592090 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || | || || |||||||||||||| Sbjct 5592091 TTTCCTGTGAGGGTCTTGACGAAAATTTGCAT 5592122 >seq115 Length=3414097 Score = 125 bits (138), Expect = 7e-24 Identities = 144/192 (75%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 |||| |||||||||||||||| | |||||| | ||||| | || ||||| ||| ||| Sbjct 442547 CTTTCTGAATGTTGTAATCTGATAGTGTGCGCCCATCTTCCAATTGTTTGCCTGCAAAAA 442606 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT--ACAAC 64371 | | | ||||||||| |||||||| |||||||| ||||| | ||||||||| ||| Sbjct 442607 TCAATCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCTTGAA--TTTTGCTTTTGACATT 442664 Query 64372 CTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTAC 64431 || | || || || || ||||| | ||| | || ||||| ||||||||||| || Sbjct 442665 TTCGATAGTGTCTGATGCCTCTACTTCAAGAGTGATTGTTTTGCCAGTCAAAGTTTTAAC 442724 Query 64432 GAAAATTTGCAT 64443 ||||| ||||| Sbjct 442725 AAAAATCTGCAT 442736 >seq20 Length=9260020 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| || || | |||| || || ||||| || |||||||| || | Sbjct 134704 ACCTCCTCTCAATCTCAGGACCAAGTGAAGTGTAGACTCTTTCTGGATGTTGTAGTCGGA 134645 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || | | ||||| | |||||| ||||| | || | ||||| ||||| || || Sbjct 134644 GAGAGTTCTTCCATCTTCTAACTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGG 134585 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||| || || || |||||| ||| ||| ||| | ||| || || || || Sbjct 134584 AATTCCTTCCTTGTCCTGGATTTTTGCCTTAACATTCTCAATTGTGTCTGATGCTTCAAC 134525 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | || ||||| |||| || || || ||||||||||| Sbjct 134524 TTCCAGGGTAATTGTTTTGCCAGTCAGCGTCTTCACAAAAATTTGCAT 134477 Score = 102 bits (112), Expect = 8e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | |||||||||||||| |||||||| || | | || | | ||| Sbjct 134916 AGGACAAGATGGAGGGTCGATTCTTTTTGGATGTTGTAGTCGGACAGAGTTCTTCCATCT 134857 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | ||||||||| ||| | || | ||||| ||||| || ||||| ||||| || || Sbjct 134856 TCCAACTGCTTGCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCC 134797 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | |||| ||||| || || | || || ||| || ||||||| ||| | ||| Sbjct 134796 TGGA-TTTTGGCTTTCACGTTTTCAATAGTGTCTGAGGCTTCAACTTCTAGAGTGATGGT 134738 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | ||||| || || || ||||| Sbjct 134737 TTTGCCTGTTAGGGTTTTGACAAAGATCTGCAT 134705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499521443944440