Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq6185 107 2e-18 >seq6185 Length=429685 Score = 107 bits (118), Expect = 2e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 159631 CAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGAC 159690 ||||| ||||| |||||||||||| | ||||| || |||||||| || |||| Sbjct 124317 CAGGTCTATCTGGATGGTGCAAATATGAATGCTCAAGTAGGTCTTTGCCGGCCTGGTGAT 124258 Query 159691 TATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGT 159750 | || ||||||||| |||| |||| ||||| ||||| ||||| ||||| |||||||| Sbjct 124257 TTCGGATCAGATGTATCTCATTTAAATTTACACAAGACTTTCTGCATTCCCCATGGAGGA 124198 Query 159751 GGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 || || || || || ||||| || || || Sbjct 124197 GGCGGACCGGGAGTTGGTCCCATAGGAGT 124169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587906017509360