Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq933 178 3e-39 seq20 167 5e-36 seq115 131 4e-25 >seq933 Length=6104033 Score = 178 bits (196), Expect = 3e-39 Identities = 170/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||| |||||| | ||| |||||||| ||||||||||| ||||| |||| || || | Sbjct 5591449 AGTCGCAAAACTAAGTGGAGAGTGGATTCTTTTTGAATGTTGTAGTCGGATAGGGTGCGG 5591508 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| | || ||||| |||||||| || ||||| ||||||||||| || ||||| Sbjct 5591509 CCATCTTCCAATTGTTTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCC 5591568 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||||||| || || |||||| ||||| |||||||| ||| ||| || || | ||| Sbjct 5591569 TTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAAGCTTCTACCTCCAAGGTG 5591628 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||||||||| | || || ||||| | |||||| Sbjct 5591629 ATAGTCTTTCCTGTGAGGGTCTTGACGAAAATTTGCAT 5591666 Score = 159 bits (176), Expect = 8e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || ||||| || || || || || |||||||| | |||||| | |||||||| || || Sbjct 5592604 TGGAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTACGGCCATCTTCCAGTTGT 5592663 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| |||||||| || ||||| ||||||||||| || ||||| |||||||| || || Sbjct 5592664 TTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGGATCTTG 5592723 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| || ||||| |||||||| ||| || ||||| | ||||| || |||||||| Sbjct 5592724 GCCTTAACATTCTCGATGGTGTCAGAAGCCTCAACTTCCAAGGTAATGGTTTTTCCTGTG 5592783 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | ||| || ||||| | |||||| Sbjct 5592784 AGAGTCTTGACGAAAATTTGCAT 5592806 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| | ||| | |||||||| || ||||||||||| ||||| |||| | || | Sbjct 5593273 AGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCGGATAAGGTGCGG 5593332 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| | || ||||| |||||||| || ||||| ||||||||||| || ||||| Sbjct 5593333 CCATCTTCTAATTGTTTACCGGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCC 5593392 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||||||| || || |||||| ||||| |||||||| || ||| || || | ||| Sbjct 5593393 TTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAGGCTTCTACCTCCAAGGTG 5593452 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||||||||| | || || ||||| | |||||| Sbjct 5593453 ATGGTCTTTCCTGTGAGGGTCTTGACGAAAATTTGCAT 5593490 Score = 154 bits (170), Expect = 3e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || ||||| || || || || || |||||||| | |||||| | |||||||| || || Sbjct 5592376 TGGAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTACGGCCATCTTCCAGTTGT 5592435 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| |||||||| || ||||| ||||||||||| || ||||| |||||||| || || Sbjct 5592436 TTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGGATCTTG 5592495 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| || ||||| |||||||| ||| || ||||| | ||| | || |||||||| Sbjct 5592496 GCCTTAACATTCTCGATGGTGTCAGAAGCCTCAACTTCCAAGGTGATGGTTTTTCCTGTG 5592555 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | ||| || ||||| | |||||| Sbjct 5592556 AGAGTCTTGACGAAAATTTGCAT 5592578 Score = 150 bits (166), Expect = 4e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| | ||| | |||||||| || ||||||||||| |||||||| | | || | Sbjct 5591677 AGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAATCTGATAAGGTGCGG 5591736 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| | || ||||| |||||||| || ||||| ||||| ||||| || ||||| Sbjct 5591737 CCATCTTCCAATTGTTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGGGATACCTTCC 5591796 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||||||| || || |||||| ||||||||||| || || || ||||| | ||| Sbjct 5591797 TTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTATCGGAGGCCTCAACTTCCAAGGTG 5591856 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||||||| || | || || ||||| | |||||| Sbjct 5591857 ATGGTCTTTCCAGTAAGGGTCTTGACGAAAATTTGCAT 5591894 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| | ||| | |||||||| || ||||||||||| ||||| |||| | || | Sbjct 5593729 AGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCGGATAAGGTGCGG 5593788 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| | || ||||| |||||||| || ||||| ||||||||||| || ||||| Sbjct 5593789 CCATCTTCTAATTGTTTACCGGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCC 5593848 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||||||| || || |||||| || || |||||||| ||| || ||||| | || Sbjct 5593849 TTGTCTTGGATCTTGGCCTTGACATTTTCGATGGTGTCGGAAGCCTCAACTTCCAAAGTG 5593908 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||||||| || | || || || || | |||||| Sbjct 5593909 ATGGTCTTTCCAGTGAGGGTCTTGACAAAAATTTGCAT 5593946 Score = 145 bits (160), Expect = 2e-29 Identities = 155/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 |||||||| || || || || || ||||| || | ||||| | |||||||| | ||| Sbjct 5593972 TGAAGAGTAGATTCCTTCTGGATGTTGTAGTCTGATAGAGTGCGGCCATCTTCTAATTGC 5594031 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| |||||||| || ||||| ||||||||||| || ||||| |||||||| || || Sbjct 5594032 TTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGGATCTTG 5594091 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 |||||| ||||| |||||||| || ||| || || | ||| | |||||||| || Sbjct 5594092 GCCTTGACATTCTCGATGGTGTCAGAGGCTTCTACCTCCAAGGTGATAGTCTTTCCGGTT 5594151 Query 195118 AAAGTTTTTACGAACACTTGCATTT 195142 | || || ||||| | ||||||| Sbjct 5594152 AGTGTCTTGACGAAGATCTGCATTT 5594176 Score = 136 bits (150), Expect = 9e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || ||||| || || || || || ||||| || | ||||| | |||||||| | ||| Sbjct 5591920 TGGAGAGTAGATTCCTTCTGGATGTTGTAGTCTGATAGAGTGCGGCCATCTTCTAATTGC 5591979 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| |||||||| || || || ||||||||||| || ||||| |||||||| || || Sbjct 5591980 TTACCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGGATCTTG 5592039 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| || || || |||||||| ||| || ||||| | ||| | ||||||||||| Sbjct 5592040 GCCTTAACATTTTCGATGGTGTCGGAAGCCTCAACTTCCAAGGTGATAGTCTTTCCTGTG 5592099 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | |||||| Sbjct 5592100 AGGGTCTTGACGAAAATTTGCAT 5592122 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| | ||| | |||||||| || ||||||||||| ||||| || | | || | Sbjct 5593501 AGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCTGATAAGGTGCGG 5593560 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| | || ||||| |||||||| || ||||| ||||||||||| || ||||| Sbjct 5593561 CCATCTTCTAATTGTTTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCC 5593620 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||||||||| || ||| || || |||||||| || || || ||||| | ||| Sbjct 5593621 TTGTCTTGAATCTTAGCCTTAACATTTTCAATGGTATCGGAGGCCTCAACTTCCAAGGTG 5593680 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | || || || || | |||||| Sbjct 5593681 ATGGTTTTCCCTGTGAGGGTCTTGACAAAAATTTGCAT 5593718 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || ||||| || || || || || || ||||| | ||| || | |||||||| || || Sbjct 5592832 TGGAGAGTAGATTCCTTCTGGATGTTATAATCAGAAAGGGTACGGCCATCTTCCAGTTGT 5592891 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| |||||||| || ||||| ||||| ||||| || ||||| |||||||| || || Sbjct 5592892 TTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGGGATACCTTCCTTGTCTTGGATCTTG 5592951 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 |||||| ||||| ||||| || || || ||||| | ||| | ||||||||||| Sbjct 5592952 GCCTTGACATTCTCGATGGTATCGGAGGCCTCGACTTCCAAGGTGATGGTCTTTCCTGTG 5593011 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || || || | |||||| Sbjct 5593012 AGGGTCTTGACAAAAATTTGCAT 5593034 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || ||||| || ||||||||||| ||||| || | | || | |||||||| | || Sbjct 5593060 TGGAGAGTTGATTCTTTTTGAATGTTGTAGTCTGATAAGGTGCGGCCATCTTCTAATTGT 5593119 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 ||||| |||||||| || ||||| ||||||||||| || ||||| ||||||||||| || Sbjct 5593120 TTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGAATCTTA 5593179 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| || || |||||||| || || || ||||| | ||| | |||||||| || Sbjct 5593180 GCCTTAACATTTTCAATGGTATCGGAGGCCTCAACTTCCAAGGTGATGGTCTTTCCAGTG 5593239 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || || || | |||||| Sbjct 5593240 AGGGTCTTGACAAAAATTTGCAT 5593262 >seq20 Length=9260020 Score = 167 bits (184), Expect = 5e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||| || | |||||| || ||||||||||| || ||||| |||| ||||| Sbjct 134470 TCTCAATCTCAGGACCAAGTGAAGGGTAGACTCTTTTTGGATGTTGTAGTCGGAGAGAGT 134411 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | ||| || || |||||||| | || |||||||| || |||||||| Sbjct 134410 TCTTCCATCTTCTAACTGTTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGAATGCC 134351 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| || |||||| ||| || |||||||| ||||| ||| || ||||| || Sbjct 134350 TTCCTTGTCCTGGATTTTTGCCTTCACATTCTCAATTGTGTCTGAAGCCTCAACTTCGAG 134291 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| | || || ||||| || || || || || | ||||| Sbjct 134290 GGTGATGGTTTTCCCTGTTAAGGTCTTGACAAAAATCTGCAT 134249 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || || || |||||||| || ||||| |||| |||||||| |||||||| Sbjct 134913 ACAAGATGGAGGGTCGATTCTTTTTGGATGTTGTAGTCGGACAGAGTTCTTCCATCTTCC 134854 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | |||||| || || ||||| | || ||||||||||| ||||||||||| ||||| || Sbjct 134853 AACTGCTTGCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGG 134794 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| || ||||| ||||| ||||| || ||| ||||| || || | || || Sbjct 134793 ATTTTGGCTTTCACGTTTTCAATAGTGTCTGAGGCTTCAACTTCTAGAGTGATGGTTTTG 134734 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| || || | ||||| Sbjct 134733 CCTGTTAGGGTTTTGACAAAGATCTGCAT 134705 >seq115 Length=3414097 Score = 131 bits (144), Expect = 4e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||| ||||| |||||||| | || || | ||||||||| | || || ||||| || | Sbjct 442547 CTTTCTGAATGTTGTAATCTGATAGTGTGCGCCCATCTTCCAATTGTTTGCCTGCAAAAA 442606 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 | | || || ||||| ||||||||||||||||||||||||||||| ||||| || | Sbjct 442607 TCAATCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCTTGAATTTTGCTTTTGACATTTT 442666 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 | || ||||| || || |||||||| || | || || || ||||||||||| || | Sbjct 442667 CGATAGTGTCTGATGCCTCTACTTCAAGAGTGATTGTTTTGCCAGTCAAAGTTTTAACAA 442726 Query 195131 ACACTTGCAT 195140 | | ||||| Sbjct 442727 AAATCTGCAT 442736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109200834933017