Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq10062 123 3e-23 seq16 95.1 1e-14 >seq10062 Length=763049 Score = 123 bits (136), Expect = 3e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 19224 ATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGC 19283 |||| ||| || | || || | |||||| |||||||| || || | ||| || || || Sbjct 235914 ATCTCTAATGTAAGTGTCGATGAGTAAACTATACATTTCAGAGTGGACATTCTCCATTGC 235973 Query 19284 CATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTC 19343 || || || || || ||||| | |||||| |||| || || || || |||||||| Sbjct 235974 TATTTGGAAGCCATAGAAACAACGTGCTTCCGTTACTTGAACCTCTTGACTGAATCTTTC 236033 Query 19344 GACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAAT 19403 |||| ||||||||||| || ||||| || ||||||||||| | |||||| ||| Sbjct 236034 TACCAGGTTTTCATTAACGATACCATCCGAGGCAGCAAAAAATGCAAGTACATGCGAAAT 236093 Query 19404 AAAATGTTTTTCATCTGAGGTTAATGTATTCCAATC 19439 ||||||||| || || | ||||| | | |||||| Sbjct 236094 AAAATGTTTCTCGTCCGGTTTTAATTTTTCCCAATC 236129 >seq16 Length=5839711 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 47046 AAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGA 47105 ||| ||||| ||| ||| ||||| | |||||| | || | ||||||| |||||| Sbjct 3530122 AAATTCCATGCATGGAAGTGCATTGACGATAATTTGGCGTAGTTTGGTTCTGCAATATGG 3530181 Query 47106 ATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATA 47165 | ||| | ||||||| ||||| || || |||||||||||||| ||||| | |||||| Sbjct 3530182 ACATTCAAAGATTGAGATTGATCTATGAAAGCACCTCTATCAGCAGCCATCTTCAAAATA 3530241 Query 47166 ACCCTTTGTGGTATCTCCCATACTGTTTTATA 47197 |||| | || |||||||| ||||| || Sbjct 3530242 GTTTTTTGGGAAATTTCCCATACAGTTTTGTA 3530273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561970022363640