Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq20 179 3e-40 seq115 158 1e-33 seq933 120 2e-22 seq828 82.4 6e-11 >seq20 Length=9260020 Score = 179 bits (198), Expect = 3e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | | ||| | || | ||| ||||| ||||||||||| || ||||| |||| Sbjct 134931 CCTCCCCGAAGACGGAGGACAAGATGGAGGGTCGATTCTTTTTGGATGTTGTAGTCGGAC 134872 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| ||||| ||||| || ||||| |||||||||||||| || || ||| Sbjct 134871 AGAGTTCTTCCATCTTCCAACTGCTTGCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGA 134812 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || ||||| ||| || |||| | |||||| || | ||| ||| Sbjct 134811 ATGCCTTCCTTGTCCTGGATTTTGGCTTTCACGTTTTCAATAGTGTCTGAGGCTTCAACT 134752 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||||| |||||||| |||| ||||| ||||| |||||||| Sbjct 134751 TCTAGAGTGATGGTTTTGCCTGTTAGGGTTTTGACAAAGATCTGCAT 134705 Score = 163 bits (180), Expect = 2e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| || | | || || ||||||||||| |||||||| || ||||| |||| | Sbjct 134475 CCTCCTCTCAATCTCAGGACCAAGTGAAGGGTAGACTCTTTTTGGATGTTGTAGTCGGAG 134416 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| || || || || || || || |||||||||||||| || || ||| Sbjct 134415 AGAGTTCTTCCATCTTCTAACTGTTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGA 134356 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || |||||| || ||| | || | ||||| || | || ||| Sbjct 134355 ATGCCTTCCTTGTCCTGGATTTTTGCCTTCACATTCTCAATTGTGTCTGAAGCCTCAACT 134296 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || |||| ||||| || ||||| || || ||||| ||||||||| Sbjct 134295 TCGAGGGTGATGGTTTTCCCTGTTAAGGTCTTGACAAAAATCTGCATG 134248 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||| || | | || || ||||| ||||| ||||| || || ||||| |||| | Sbjct 134703 CCTCCTCTCAATCTCAGGACCAAGTGAAGTGTAGACTCTTTCTGGATGTTGTAGTCGGAG 134644 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| || || ||||| || || || |||||||||||||| || || ||| Sbjct 134643 AGAGTTCTTCCATCTTCTAACTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGA 134584 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || || || |||||| || ||| | || | ||||| || | ||| ||| Sbjct 134583 ATTCCTTCCTTGTCCTGGATTTTTGCCTTAACATTCTCAATTGTGTCTGATGCTTCAACT 134524 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || | |||||||| || | || || ||||| || ||||| Sbjct 134523 TCCAGGGTAATTGTTTTGCCAGTCAGCGTCTTCACAAAAATTTGCAT 134477 >seq115 Length=3414097 Score = 158 bits (174), Expect = 1e-33 Identities = 149/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 101280 CTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATA 101339 |||| || || |||||||| | | || | |||| |||||||| || |||||||| | Sbjct 442547 CTTTCTGAATGTTGTAATCTGATAGTGTGCGCCCATCTTCCAATTGTTTGCCTGCAAAAA 442606 Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399 |||| | ||| || || || |||||||||||||| ||||||||||| ||| ||| ||| Sbjct 442607 TCAATCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCTTGAATTTTGCTTTTGACATTTT 442666 Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459 | | |||||| || | || ||||||||||||| |||||||| || |||||||| |||| Sbjct 442667 CGATAGTGTCTGATGCCTCTACTTCAAGAGTGATTGTTTTGCCAGTCAAAGTTTTAACAA 442726 Query 101460 ATATCTGCAT 101469 | |||||||| Sbjct 442727 AAATCTGCAT 442736 >seq933 Length=6104033 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | |||||||||||| |||||||| || || || ||||| || | | ||| | | | Sbjct 5593959 ACGGAGAACTAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCTGATAGAGTGCGGCC 5594018 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || ||||||||||| || || || | ||| || || || || || || ||||| || Sbjct 5594019 ATCTTCTAATTGCTTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTT 5594078 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| || || || ||| | || | |||||||| | ||| || || | |||| Sbjct 5594079 GTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAGGCTTCTACCTCCAAGGTGAT 5594138 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||||| || || || || |||||||| Sbjct 5594139 AGTCTTTCCGGTTAGTGTCTTGACGAAGATCTGCAT 5594174 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 |||||||||||| || ||||||||||| || ||||| |||| | || | | |||| || Sbjct 5593737 AACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCGGATAAGGTGCGGCCATCTTC 5593796 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 ||||| ||||| || || || | ||| || || || || || || ||||| || ||||| Sbjct 5593797 TAATTGTTTACCGGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCTTG 5593856 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || || ||| |||| | ||||| || | || ||||| | ||||| || || Sbjct 5593857 GATCTTGGCCTTGACATTTTCGATGGTGTCGGAAGCCTCAACTTCCAAAGTGATGGTCTT 5593916 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || ||||| || ||||| Sbjct 5593917 TCCAGTGAGGGTCTTGACAAAAATTTGCAT 5593946 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||||||||| || |||||||| || || || ||||| || | | ||| | | |||| || Sbjct 5592141 AACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCTGATAGAGTGCGGCCATCTTC 5592200 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 ||||||||||| || || || | ||| || || || || || || ||||| || ||||| Sbjct 5592201 TAATTGCTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGGGATACCTTCCTTGTCTTG 5592260 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || || ||| | || | ||| ||||| | || ||||| | |||| ||||| Sbjct 5592261 GATCTTGGCCTTAACATTCTCGATAGTATCAGAGGCCTCTACTTCCAAGGTGATGGTTTT 5592320 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | ||| || || || || ||||| Sbjct 5592321 TCCTGTGAGAGTCTTGACGAAAATTTGCAT 5592350 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 |||||||||||| || ||||||||||| || ||||| || | | || | | |||| || Sbjct 5593509 AACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCTGATAAGGTGCGGCCATCTTC 5593568 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 ||||| ||||| || || || | ||| || || || || || || ||||| || ||||| Sbjct 5593569 TAATTGTTTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCTTG 5593628 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 ||| || || ||| |||| | || || || | || ||||| | |||| ||||| Sbjct 5593629 AATCTTAGCCTTAACATTTTCAATGGTATCGGAGGCCTCAACTTCCAAGGTGATGGTTTT 5593688 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || ||||| || ||||| Sbjct 5593689 CCCTGTGAGGGTCTTGACAAAAATTTGCAT 5593718 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||||||||| || |||||||| || || || ||||| || | | ||| | | | Sbjct 5591907 ACGGAGAACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCTGATAGAGTGCGGCC 5591966 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || ||||||||||| || || || | |||||| || || || || || ||||| || Sbjct 5591967 ATCTTCTAATTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATACCTTCCTT 5592026 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| || || || ||| |||| | ||||| || | || ||||| | |||| Sbjct 5592027 GTCTTGGATCTTGGCCTTAACATTTTCGATGGTGTCGGAAGCCTCAACTTCCAAGGTGAT 5592086 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || | || || || || || ||||| Sbjct 5592087 AGTCTTTCCTGTGAGGGTCTTGACGAAAATTTGCAT 5592122 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314 || |||||||| || || || ||||||||||| || ||||| |||| | || | | || Sbjct 5591452 CGCAAAACTAAGTGGAGAGTGGATTCTTTTTGAATGTTGTAGTCGGATAGGGTGCGGCCA 5591511 Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374 || |||||||| ||||| || || || | ||| || || || || || || ||||| || Sbjct 5591512 TCTTCCAATTGTTTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTG 5591571 Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434 ||||| || || || ||| | || | |||||||| | ||| || || | |||| Sbjct 5591572 TCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAAGCTTCTACCTCCAAGGTGATA 5591631 Query 101435 GTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || | || || || || || ||||| Sbjct 5591632 GTCTTTCCTGTGAGGGTCTTGACGAAAATTTGCAT 5591666 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 |||||||||||| || ||||||||||| || ||||| |||| | || | | |||| || Sbjct 5593281 AACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCGGATAAGGTGCGGCCATCTTC 5593340 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 ||||| ||||| || || || | ||| || || || || || || ||||| || ||||| Sbjct 5593341 TAATTGTTTACCGGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCTTG 5593400 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || || ||| | || | |||||||| | ||| || || | |||| || || Sbjct 5593401 GATCTTGGCCTTGACATTCTCGATGGTGTCAGAGGCTTCTACCTCCAAGGTGATGGTCTT 5593460 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || || || || ||||| Sbjct 5593461 TCCTGTGAGGGTCTTGACGAAAATTTGCAT 5593490 Score = 102 bits (112), Expect = 6e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||||||||| || || ||||||||||| || ||||| || | | || | | | Sbjct 5593047 ACGGAGAACTAAATGGAGAGTTGATTCTTTTTGAATGTTGTAGTCTGATAAGGTGCGGCC 5593106 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || ||||| ||||| || || || | ||| || || || || || || ||||| || Sbjct 5593107 ATCTTCTAATTGTTTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTT 5593166 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 |||||||| || || ||| |||| | || || || | || ||||| | |||| Sbjct 5593167 GTCTTGAATCTTAGCCTTAACATTTTCAATGGTATCGGAGGCCTCAACTTCCAAGGTGAT 5593226 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || | || || ||||| || ||||| Sbjct 5593227 GGTCTTTCCAGTGAGGGTCTTGACAAAAATTTGCAT 5593262 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 |||||||||||| || ||||||||||| || |||||||| | | || | | |||| || Sbjct 5591685 AACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAATCTGATAAGGTGCGGCCATCTTC 5591744 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 |||||| ||||| || || || | ||| || || || || || || ||||| || ||||| Sbjct 5591745 CAATTGTTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGGGATACCTTCCTTGTCTTG 5591804 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || || ||| | || | || || || | || ||||| | |||| || || Sbjct 5591805 GATCTTGGCCTTGACATTCTCAATGGTATCGGAGGCCTCAACTTCCAAGGTGATGGTCTT 5591864 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || || || || ||||| Sbjct 5591865 TCCAGTAAGGGTCTTGACGAAAATTTGCAT 5591894 >seq828 Length=2020852 Score = 82.4 bits (90), Expect = 6e-11 Identities = 97/130 (75%), Gaps = 1/130 (1%) Strand=Plus/Plus Query 13629 TTTTATTAATGTAACAATCTATATTGAATTTTCGTTTACAACCTTCAAAATTCATGTGTC 13688 ||| |||| |||| | || |||| |||||| | ||| ||||||||| ||||||||| | Sbjct 1002431 TTTGATTA-TGTACCCATTAATATCGAATTTCCTTTTGCAACCTTCATAATTCATGTAGC 1002489 Query 13689 GTATTTTACCATAGATTGGTCGCTCCATCCAGGCACGATCGTGAGTTCCGCATATTGACC 13748 | ||||| ||| | | || || || |||| | ||||||| | || || ||||||| Sbjct 1002490 GGATTTTGCCAAATACTGCTCTTTCACTCCATCCTTGATCGTGGATACCACAAATTGACC 1002549 Query 13749 ACATGCAACC 13758 ||||||| || Sbjct 1002550 ACATGCATCC 1002559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396183009721107