Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2537 123 3e-22 seq1014 114 2e-19 seq2156 111 2e-18 seq17067 109 7e-18 >seq2537 Length=17043 Score = 123 bits (136), Expect = 3e-22 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 |||| ||| ||| | | || || | |||||||||||||| || || | | ||| || Sbjct 6984 GCCAATTCTCCGGGGAGGAGAAGCCTGACGGCGGTCTGGATTTCCCGGGAGGTGATGGTA 7043 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 | |||||| |||| | ||||||| ||| |||| | ||||||| |||| |||||| Sbjct 7044 GACCTCTTGTTGTAGTGGGAGAGACGGCTGGCTTCGGCGGCGATGCGTTCGAAGATGTCG 7103 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 ||||| || |||||||||| ||||| | |||| ||||| || |||||||||||| Sbjct 7104 TTGACGAAGGAGTTCATGATGGACATAGCCTTGGAGGAGACTCCGGTATCGGGGTGCACC 7163 Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548 || || | || ||||||||| Sbjct 7164 TGTTTCAAGACTTTGTAGATG 7184 >seq1014 Length=9355 Score = 114 bits (126), Expect = 2e-19 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| | | || || | || || ||||||||||| || | | || Sbjct 75 GCTTGGCCAATTCACCGGGGAGGAGGAGCCTGACAGCAGTCTGGATCTCCCGGGAGGTGA 134 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| | |||||| |||| | ||||||| || |||| | |||| || |||| | Sbjct 135 TGGTGGACCTCTTGTTGTAGTGGGAGAGACGGCTAGCTTCGGCGGCGATACGCTCGAAGA 194 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||||| | |||| ||| | || |||||||| Sbjct 195 TGTCGTTGACGAAGGAGTTCATGATAGACATAGCCTTGGAGGAAACTCCGGTGTCGGGGT 254 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || ||||| | || ||||||||| Sbjct 255 GAACTTGCTTCAAGACTTTGTAGATG 280 >seq2156 Length=2923 Score = 111 bits (122), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| | | || || | || ||||||||||| || || | | || Sbjct 1842 GCTTGGCCAATTCTCCGGGGAGGAGGAGCCTGACAGCGGTCTGGATTTCCCGGGAGGTGA 1901 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| | |||||| |||| | ||||||| || |||| | |||| || |||| | Sbjct 1902 TGGTGGACCTCTTGTTGTAGTGGGAGAGACGGCTAGCTTCGGCGGCGATACGTTCGAAGA 1961 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||||| | |||| ||| | || |||||||| Sbjct 1962 TGTCGTTGACGAAGGAGTTCATGATAGACATAGCCTTGGAGGAAACTCCGGTGTCGGGGT 2021 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || || || | || ||||||||| Sbjct 2022 GAACTTGTTTCAAGACTTTGTAGATG 2047 >seq17067 Length=3875089 Score = 109 bits (120), Expect = 7e-18 Identities = 108/138 (78%), Gaps = 4/138 (3%) Strand=Plus/Plus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAA--GCCTCTGCTCGATC 1592222 ||||||||||| || || | ||||||||||| || || ||||| | |||| | ||| Sbjct 107040 ACCCTCTTTGAATTAATTTTGGCCGCCAACTATCTGGATATCAAAGGACTCT--TAGATT 107097 Query 1592223 TTGGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGA 1592282 | |||||| |||| |||||||||||||| |||||| | || ||||| |||||||||| Sbjct 107098 GTACATGCAAGACTGTAGCCAACATGATCAAAGGCAAGGCTCCTGAGGAAATCCGCAAGA 107157 Query 1592283 CCTTTAACATCAAGTACG 1592300 | || ||||||| | ||| Sbjct 107158 CGTTCAACATCAGGAACG 107175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6105518340446067