Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2537 163 4e-34 seq1014 154 2e-31 seq2156 149 1e-29 seq17067 105 1e-16 >seq2537 Length=17043 Score = 163 bits (180), Expect = 4e-34 Identities = 183/243 (75%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| || || |||||||||||| | |||| ||| ||| | | Sbjct 6940 TGTACTTGGTGACAGCCTTGGTTCCTTCAGAGACGGCGTGCTTAGCCAATTCTCCGGGGA 6999 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 || || | |||||||||||||| || |||| | ||| || | ||||| |||| Sbjct 7000 GGAGAAGCCTGACGGCGGTCTGGATTTCCCGGGAGGTGATGGTAGACCTCTTGTTGTAGT 7059 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | | | || |||| ||| |||| | ||||||| |||| ||||||||||| || ||||| Sbjct 7060 GGGAG--AGACGGCTGGCTTCGGCGGCGATGCGTTCGAAGATGTCGTTGACGAAGGAGTT 7117 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | ||| ||||| || |||||||||||||| || | || || Sbjct 7118 CATGATGGACATAGCCTTGGAGGAGACTCCGGTATCGGGGTGCACCTGTTTCAAGACTTT 7177 Query 1485708 GTA 1485710 ||| Sbjct 7178 GTA 7180 >seq1014 Length=9355 Score = 154 bits (170), Expect = 2e-31 Identities = 181/243 (74%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| || || |||||||||||| |||||| ||| ||| | | Sbjct 36 TGTACTTGGTGACAGCCTTGGTTCCTTCCGAGACGGCGTGCTTGGCCAATTCACCGGGGA 95 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 || || | || || ||||||||||| |||| | ||| ||| | ||||| |||| Sbjct 96 GGAGGAGCCTGACAGCAGTCTGGATCTCCCGGGAGGTGATGGTGGACCTCTTGTTGTAGT 155 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | | | || |||| || |||| | |||| || |||| ||||||||||| || ||||| Sbjct 156 GGGAG--AGACGGCTAGCTTCGGCGGCGATACGCTCGAAGATGTCGTTGACGAAGGAGTT 213 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | ||| ||| | || ||||||||| || ||||| | || || Sbjct 214 CATGATAGACATAGCCTTGGAGGAAACTCCGGTGTCGGGGTGAACTTGCTTCAAGACTTT 273 Query 1485708 GTA 1485710 ||| Sbjct 274 GTA 276 >seq2156 Length=2923 Score = 149 bits (164), Expect = 1e-29 Identities = 180/243 (74%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| || || |||||||||||| |||||| ||| ||| | | Sbjct 1803 TGTACTTGGTGACAGCCTTGGTTCCTTCCGAGACGGCGTGCTTGGCCAATTCTCCGGGGA 1862 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587 || || | || ||||||||||| || |||| | ||| ||| | ||||| |||| Sbjct 1863 GGAGGAGCCTGACAGCGGTCTGGATTTCCCGGGAGGTGATGGTGGACCTCTTGTTGTAGT 1922 Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | | | || |||| || |||| | |||| || |||| ||||||||||| || ||||| Sbjct 1923 GGGAG--AGACGGCTAGCTTCGGCGGCGATACGTTCGAAGATGTCGTTGACGAAGGAGTT 1980 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707 |||||| ||||| | ||| ||| | || ||||||||| || || || | || || Sbjct 1981 CATGATAGACATAGCCTTGGAGGAAACTCCGGTGTCGGGGTGAACTTGTTTCAAGACTTT 2040 Query 1485708 GTA 1485710 ||| Sbjct 2041 GTA 2043 >seq17067 Length=3875089 Score = 105 bits (116), Expect = 1e-16 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 2035614 GTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCC 2035673 ||||| ||| ||||||||||| || || | ||||||||||| || || ||||| Sbjct 107028 GTCGATCAAGGTACCCTCTTTGAATTAATTTTGGCCGCCAACTATCTGGATATCAAAGGA 107087 Query 2035674 CTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGAC 2035733 ||| | |||| |||||||| || |||||| | ||||| |||||| | || ||||| Sbjct 107088 CTCTTAGATTGTACATGCAAGACTGTAGCCAACATGATCAAAGGCAAGGCTCCTGAGGAA 107147 Query 2035734 ATCCGCAAGACCTTTAACATCAAGTACG 2035761 ||||||||||| || ||||||| | ||| Sbjct 107148 ATCCGCAAGACGTTCAACATCAGGAACG 107175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914145396045689