Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq16 116 9e-21 >seq16 Length=5839711 Score = 116 bits (128), Expect = 9e-21 Identities = 163/226 (72%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 110757 TTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAA 110816 ||||| || ||||| |||||||||||| | ||||| |||||||| ||||| ||| || Sbjct 3537835 TTTGCAATTTATCTGGAACCTTGGCATGCGGATATTTTTGAATTTTTAGA-CTTGAAGAA 3537777 Query 110817 AATCA-AGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGA 110875 || || |||| |||||| ||||||||||| | ||||| || | |||||| | || Sbjct 3537776 AAACACAGGAAAAGAAGAAGTGCGAGCACGTGATCTCTTTTACGCCCTTTGGATTCCTGA 3537717 Query 110876 TTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTC 110935 | ||||||||| | ||| || | ||||| ||||| ||| |||||||| | | Sbjct 3537716 TGAATTCATGAAGAGAGTTGAACAGAATGGAGTGTGGAGTCTCATGTGTCCGAACGACTG 3537657 Query 110936 TCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTAC 110981 |||||| | || ||| | ||| ||||||| | | | |||||| Sbjct 3537656 TCCTGGATTGTCAGATTGCTGGGGAGAAGAGTTCGTAAAACTTTAC 3537611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186512465523711