Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq105 91.5 2e-13 >seq105 Length=4822286 Score = 91.5 bits (100), Expect = 2e-13 Identities = 222/334 (66%), Gaps = 2/334 (1%) Strand=Plus/Minus Query 146997 GTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCC 147056 ||| || | |||||| || || ||||| || || |||| ||||| || || || ||||| Sbjct 224298 GTGAGCGATCATGTATGTAAGTAGCGAATAACTTGCTACATTGAACGGCACACCAAGGCC 224239 Query 147057 CATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTG 147116 |||||| | || |||||||| | | || || ||||| || | || || |||||||| Sbjct 224238 CATGTCAGCAGATCTCTGGTATAATAGACATGACAGCTCGCCATTAGCGACATAAAACTG 224179 Query 147117 GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGA 147176 ||| |||||| || ||||| ||||| || ||||| | || ||||| || | Sbjct 224178 AACAAGGCAGTGGCAAGGAGGCAGGGCCATTTTAGGAAGGTCTACAGGATTCCAAGCACA 224119 Query 147177 GACCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCT 147235 | | | || | | || | |||||| || ||| |||||| || |||| | Sbjct 224118 CATTATAATGCGGC-GATCATTGGGGTTTGATTTGATCGTTTCGATCACTTCTTTCAGTT 224060 Query 147236 GGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCC 147295 |||| | ||| || ||| | ||| ||| ||| ||| ||| |||| | Sbjct 224059 GGTCAATGCCTTGATTGGTGTAATCTGTGAACATATCCTTATACTCGGCACCATAGTGAC 224000 Query 147296 TCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 |||||||||||| || || || |||| ||| || Sbjct 223999 GCCACTGGAAGCCATAAACAGGACCCAAGTCACC 223966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583343944106400