Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2537 131 2e-24 seq1014 118 2e-20 seq2156 113 6e-19 >seq2537 Length=17043 Score = 131 bits (144), Expect = 2e-24 Identities = 170/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||| || | || |||||||||||| |||| | | | |||||||| | | Sbjct 7183 ATCTACAAAGTCTTGAAACAGGTGCACCCCGATACCG--GAGTC-TCCTCCAA---GGCT 7130 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || ||||||||||| |||| ||||||| | |||| ||| | Sbjct 7129 ATGTCCATCATGAACTCCTTCGTCAACGACATCTTCGAACGCATCGCCGCCGAAGCCAGC 7070 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || | | || ||||||| | || ||| | | || || |||||||||||||| Sbjct 7069 CGTCTCTCCCACTACAACAAGAGGTCTACCATCACCTCCCGGGAAATCCAGACCGCCGTC 7010 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | || || | | ||| ||| |||| | |||||||||||| || || |||| Sbjct 7009 AGGCTTCTCCTCCCCGGAGAATTGGCTAAGCACGCCGTCTCTGAAGGAACCA 6958 >seq1014 Length=9355 Score = 118 bits (130), Expect = 2e-20 Identities = 166/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||| || | ||||| || |||||| |||| | |||||||| | | Sbjct 279 ATCTACAAAGTCTTGAAGCAAGTTCACCCCGACACCGGAGTT---TCCTCCAA---GGCT 226 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || ||||||||||| |||| || |||| | |||| || | Sbjct 225 ATGTCTATCATGAACTCCTTCGTCAACGACATCTTCGAGCGTATCGCCGCCGAAGCTAGC 166 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || | | || ||||||| | ||| ||| | | || ||||||||||| || || Sbjct 165 CGTCTCTCCCACTACAACAAGAGGTCCACCATCACCTCCCGGGAGATCCAGACTGCTGTC 106 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | || || | | ||| ||| |||||| |||||||||||| || || |||| Sbjct 105 AGGCTCCTCCTCCCCGGTGAATTGGCCAAGCACGCCGTCTCGGAAGGAACCA 54 >seq2156 Length=2923 Score = 113 bits (124), Expect = 6e-19 Identities = 165/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||| || | || || || |||||| |||| | |||||||| | | Sbjct 2046 ATCTACAAAGTCTTGAAACAAGTTCACCCCGACACCGGAGTT---TCCTCCAA---GGCT 1993 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || ||||||||||| |||| || |||| | |||| || | Sbjct 1992 ATGTCTATCATGAACTCCTTCGTCAACGACATCTTCGAACGTATCGCCGCCGAAGCTAGC 1933 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || | | || ||||||| | ||| ||| | | || || ||||||||||| || Sbjct 1932 CGTCTCTCCCACTACAACAAGAGGTCCACCATCACCTCCCGGGAAATCCAGACCGCTGTC 1873 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | || || | | ||| ||| |||||| |||||||||||| || || |||| Sbjct 1872 AGGCTCCTCCTCCCCGGAGAATTGGCCAAGCACGCCGTCTCGGAAGGAACCA 1821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7175906179747662