Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq10062 84.2 3e-11 >seq10062 Length=763049 Score = 84.2 bits (92), Expect = 3e-11 Identities = 150/218 (69%), Gaps = 12/218 (6%) Strand=Plus/Plus Query 122680 TCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCTTC 122739 |||||||| || || |||||||| ||| || || ||||| | ||||| |||||| Sbjct 235003 TCATCTCGAGAGATTAGTTCATTGCTGAAAGTGAGGCCAGGCATCAAACCCCTTTTCTTC 235062 Query 122740 AACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACGCA 122799 | ||| |||| | | ||| || ||||||||||| || |||||| ||||| ||| Sbjct 235063 AGCCAGAAAATTGAGGCGAAACTGCCAGAGAAGAAGATTCCTTCCACAGCTGCAAATGCA 235122 Query 122800 AAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCA------AACCATTTCATTGCCCAT 122853 | | |||||||||| ||| || ||||||| | ||||||||| ||||| Sbjct 235123 ATCACTCGTTCGGCGA---AGCTTGA---TGCATCATCAGCGATCCATTTCATGGCCCAG 235176 Query 122854 TTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 122891 | || ||| ||| | ||| || | |||| ||||| Sbjct 235177 TCTGCTTTCCTCTTTACACAAGGCATTGTTTCAATGGC 235214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627876946749600