Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq10062 93.3 5e-14 >seq10062 Length=763049 Score = 93.3 bits (102), Expect = 5e-14 Identities = 130/182 (71%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 59931 AAAGCAGAATGGGCCATGCAGTGGATGAGTCCTGGAGCATCA---TTTGCACAACGTCTC 59987 |||||||| ||||||||| | ||||| | || |||||| || || |||| | Sbjct 235184 AAAGCAGACTGGGCCATGAAATGGATCGCTGATGATGCATCAAGCTTCGCCGAACGAGTG 235125 Query 59988 ATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGG 60047 || || |||||| |||||||||||||||||||||||| ||| | ||||||||| Sbjct 235124 ATTGCATTTGCAGCTGTGGAAGGAATCTTCTTCTCTGGCAGTTTCGCCTCAATTTTCTGG 235065 Query 60048 CTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGAC 60107 || || || | || | ||||| ||||| | |||| ||| || || || || || || Sbjct 235064 CTGAAGAAAAGGGGTTTGATGCCTGGCCTCACTTTCAGCAATGAACTAATCTCTCGAGAT 235005 Query 60108 GA 60109 || Sbjct 235004 GA 235003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548389376083440