Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq10062 82.4 8e-11 >seq10062 Length=763049 Score = 82.4 bits (90), Expect = 8e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 ||||| ||||| |||| ||||| ||||| || || ||| ||||| || |||||||| Sbjct 442041 GTGAAAATGTAACGGGGACTGGCTGCATCTTTACCTCCTTGCAGCCTTGTACCAAACTGA 441982 Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148 || |||| | ||| || | ||| || | ||| || |||||||||||||| || ||| Sbjct 441981 CCGTTGGGCATTAAGAGATTAATGTTATTAGAGCCAACAAAATTCTGAGCCAAGTTAACA 441922 Query 152149 ATCGT 152153 || || Sbjct 441921 ATGGT 441917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547080899209800