Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq105 104 2e-17 >seq105 Length=4822286 Score = 104 bits (114), Expect = 2e-17 Identities = 222/332 (67%), Gaps = 0/332 (0%) Strand=Plus/Plus Query 34394 GGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGG 34453 || |||||||| || || || || ||||||||| | |||| ||| || |||||| || Sbjct 223966 GGTGACTTGGGTCCTGTTTATGGCTTCCAGTGGCGTCACTATGGTGCCGAGTATAAGGAT 224025 Query 34454 AGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTG 34513 | | || || | || || ||||| ||| | | |||||||| || | Sbjct 224026 ATGTTCACAGATTACACCAATCAAGGCATTGACCAACTGAAAGAAGTGATCGAAACGATC 224085 Query 34514 AAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCT 34573 || ||||| |||| | | || | ||||| || ||||| || || || ||| Sbjct 224086 AAATCAAACCCCAATGATCGCCGCATTATAATGTGTGCTTGGAATCCTGTAGACCTTCCT 224145 Query 34574 CTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTG 34633 ||||| || || || |||||| ||| || || || ||||| ||||| |||||| Sbjct 224146 AAAATGGCCCTGCCTCCTTGCCACTGCCTTGTTCAGTTTTATGTCGCTAATGGCGAGCTG 224205 Query 34634 TCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCT 34693 || || | | || || |||| | |||||||| | || ||||||||||| | || Sbjct 224206 TCATGTCTATTATACCAGAGATCTGCTGACATGGGCCTTGGTGTGCCGTTCAATGTAGCA 224265 Query 34694 AGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| | || || || |||||||||||||| Sbjct 224266 AGTTATTCGCTACTTACATACATGATCGCTCA 224297 Score = 104 bits (114), Expect = 2e-17 Identities = 222/332 (67%), Gaps = 0/332 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 |||||||||||||| || || || | ||||| || | ||||||||||| || | ||| Sbjct 224297 TGAGCGATCATGTATGTAAGTAGCGAATAACTTGCTACATTGAACGGCACACCAAGGCCC 224238 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 ||||| | |||| || || | | || |||||||| ||||| ||||| || || || Sbjct 224237 ATGTCAGCAGATCTCTGGTATAATAGACATGACAGCTCGCCATTAGCGACATAAAACTGA 224178 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCAC 6799 ||| |||||| || || || ||||| ||| || || || ||||| || ||| Sbjct 224177 ACAAGGCAGTGGCAAGGAGGCAGGGCCATTTTAGGAAGGTCTACAGGATTCCAAGCACAC 224118 Query 6800 ATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGG 6859 || | || | | |||| ||||| || | || |||||||| | | ||| ||| Sbjct 224117 ATTATAATGCGGCGATCATTGGGGTTTGATTTGATCGTTTCGATCACTTCTTTCAGTTGG 224058 Query 6860 TCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTC 6919 || || || | || || | | || |||||| || ||| |||| | | Sbjct 224057 TCAATGCCTTGATTGGTGTAATCTGTGAACATATCCTTATACTCGGCACCATAGTGACGC 223998 Query 6920 CACTGGAACCCGTAGACCGGGCCCAAGTCGCC 6951 |||||||| || || || || |||||||| || Sbjct 223997 CACTGGAAGCCATAAACAGGACCCAAGTCACC 223966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448151729616720