Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq115 93.3 3e-14 >seq115 Length=3414097 Score = 93.3 bits (102), Expect = 3e-14 Identities = 137/192 (71%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 101049 CTTTTTGAATATTGTAATCGGCCATAGTTTTGGA--ATCTTCCAATTGTTTGCCCGCATA 101106 |||| ||||| |||||||| | ||||| | | |||||||||||||||||| ||| | Sbjct 442547 CTTTCTGAATGTTGTAATCTG--ATAGTGTGCGCCCATCTTCCAATTGTTTGCCTGCAAA 442604 Query 101107 TATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATC 101166 || | || || ||||| || | |||||||||||| |||||| ||| |||| Sbjct 442605 AATCAATCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCTTGAATTTTGCTTTTGACATT 442664 Query 101167 GGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAAT 101226 | | || |||| | | | ||| | || || |||||||| ||||| ||||||| Sbjct 442665 TTCGATAGTGTCTGATGCCTCTACTTCAAGAGTGATTGTTTTGCCAGTCAAAGTTTTAAC 442724 Query 101227 AAAAATTTGCAT 101238 |||||| ||||| Sbjct 442725 AAAAATCTGCAT 442736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409562188372509