Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq20 149 1e-30 seq933 145 2e-29 seq115 118 2e-21 >seq20 Length=9260020 Score = 149 bits (164), Expect = 1e-30 Identities = 165/218 (76%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| ||||| | ||||| ||||||||||| ||||||||||| |||| | |||||| || Sbjct 134692 TCTCAGGACCAAGTGAAGTGTAGACTCTTTCTGGATGTTGTAGTCGGAGAGAGTTCTTCC 134633 Query 151949 ATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| ||||| ||||||||||| | | ||| ||||| | | ||||||||| Sbjct 134632 ATCTTCTAACTGCTTT--CCGGCGAAGATCAAACGCTGTTGGTCAGGGGGAATTCCTTCC 134575 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || |||||| || ||| |||| | ||||||| || ||||| || ||| Sbjct 134574 TTGTCCTGGATTTTTGCCTTAACATTCTCAATTGTGTCTGATGCTTCAACTTCCAGGGTA 134515 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| || || |||||||| || | ||||| Sbjct 134514 ATTGTTTTGCCAGTCAGCGTCTTCACAAAAATTTGCAT 134477 Score = 147 bits (162), Expect = 5e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| ||||| | ||||| ||||||||||||||||||||||| |||| | |||||| || Sbjct 134464 TCTCAGGACCAAGTGAAGGGTAGACTCTTTTTGGATGTTGTAGTCGGAGAGAGTTCTTCC 134405 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| ||| ||||||||||| | | ||| ||||| | | || |||||||| Sbjct 134404 ATCTTCTAACTGTTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGGGGAATGCCTTCCTT 134345 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || || |||||| || ||| |||| | |||||||| ||| ||||| || || || Sbjct 134344 GTCCTGGATTTTTGCCTTCACATTCTCAATTGTGTCTGAAGCCTCAACTTCGAGGGTGAT 134285 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || | ||||| || || | |||||| Sbjct 134284 GGTTTTCCCTGTTAAGGTCTTGACAAAAATCTGCAT 134249 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||||||||| || || || ||||||||||||||||| |||| | |||||| ||||| Sbjct 134917 GAGGACAAGATGGAGGGTCGATTCTTTTTGGATGTTGTAGTCGGACAGAGTTCTTCCATC 134858 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| | || || || ||||| | | ||| ||||| | | || |||||||| || Sbjct 134857 TTCCAACTGCTTGCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTC 134798 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || ||||| ||| || | || | ||||||| || ||||| ||||| || || Sbjct 134797 CTGGATTTTGGCTTTCACGTTTTCAATAGTGTCTGAGGCTTCAACTTCTAGAGTGATGGT 134738 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||| || || || || || |||| |||||| Sbjct 134737 TTTGCCTGTTAGGGTTTTGACAAAGATCTGCAT 134705 >seq933 Length=6104033 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||||||| || | ||||||||| || |||||||| |||||||| |||| ||| || | Sbjct 5593729 AGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCGGATAAGGTGCGG 5593788 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||||| ||| ||||||||||| || | |||||||| | | ||| |||||| Sbjct 5593789 CCATCTTCTAATTGTTTACCGGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCC 5593848 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||| || || |||||| | || | | |||| ||| ||| ||||| | ||| Sbjct 5593849 TTGTCTTGGATCTTGGCCTTGACATTTTCGATGGTGTCGGAAGCCTCAACTTCCAAAGTG 5593908 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| ||||| || || | ||||| Sbjct 5593909 ATGGTCTTTCCAGTGAGGGTCTTGACAAAAATTTGCAT 5593946 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||||||| || | ||||||||| || |||||||| |||||||| |||| ||| || | Sbjct 5593273 AGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAGTCGGATAAGGTGCGG 5593332 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||||| ||| ||||||||||| || | |||||||| | | ||| |||||| Sbjct 5593333 CCATCTTCTAATTGTTTACCGGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCC 5593392 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||| || || |||||| |||| | | |||| || ||||| || | || Sbjct 5593393 TTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAGGCTTCTACCTCCAAGGTG 5593452 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| ||||| ||||| | ||||| Sbjct 5593453 ATGGTCTTTCCTGTGAGGGTCTTGACGAAAATTTGCAT 5593490 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||| |||||||| || || |||||||||||||| | | ||| | Sbjct 5592588 GAGACGGAGAACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTACG 5592647 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || ||| || |||||||| || | |||||||| | | ||| ||||| Sbjct 5592648 GCCATCTTCCAGTTGTTTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTC 5592707 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || || ||| |||| | | |||| ||| ||| ||||| | || Sbjct 5592708 CTTGTCTTGGATCTTGGCCTTAACATTCTCGATGGTGTCAGAAGCCTCAACTTCCAAGGT 5592767 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| ||||| || ||||||||||| ||||| | ||||| Sbjct 5592768 AATGGTTTTTCCTGTGAGAGTCTTGACGAAAATTTGCAT 5592806 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | ||| |||||||| || || |||||||||||||| | | ||| | Sbjct 5592360 GAGACGGAGAACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTACG 5592419 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || ||| || |||||||| || | |||||||| | | ||| ||||| Sbjct 5592420 GCCATCTTCCAGTTGTTTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTC 5592479 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || || ||| |||| | | |||| ||| ||| ||||| | || Sbjct 5592480 CTTGTCTTGGATCTTGGCCTTAACATTCTCGATGGTGTCAGAAGCCTCAACTTCCAAGGT 5592539 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || ||||||||||| ||||| | ||||| Sbjct 5592540 GATGGTTTTTCCTGTGAGAGTCTTGACGAAAATTTGCAT 5592578 Score = 134 bits (148), Expect = 3e-26 Identities = 163/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | |||||||||||| || || ||||||||||| || | || ||| | Sbjct 5593956 GAGACGGAGAACTAAATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCTGATAGAGTGCG 5594015 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||||| || || |||||||| || | |||||||| | | ||| ||||| Sbjct 5594016 GCCATCTTCTAATTGCTTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTC 5594075 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || |||||| |||| | | |||| || ||||| || | || Sbjct 5594076 CTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAGGCTTCTACCTCCAAGGT 5594135 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| || || || || ||||| ||||||| ||||||||| Sbjct 5594136 GATAGTCTTTCCGGTTAGTGTCTTGACGAAGATCTGCATTTT 5594177 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||||||| || | ||||||||| || |||||||| ||||||||||| | ||| || | Sbjct 5591677 AGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTAATCTGATAAGGTGCGG 5591736 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| | ||| || |||||||| || | |||||||||| | ||| |||||| Sbjct 5591737 CCATCTTCCAATTGTTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGGGATACCTTCC 5591796 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||| || || |||||| |||| | | | || || ||| ||||| | || Sbjct 5591797 TTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTATCGGAGGCCTCAACTTCCAAGGTG 5591856 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || || ||||| ||||| | ||||| Sbjct 5591857 ATGGTCTTTCCAGTAAGGGTCTTGACGAAAATTTGCAT 5591894 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||||||| || | ||| |||||||| || || ||||||||||| || | || ||| | Sbjct 5592133 AGTCTGAGAACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCTGATAGAGTGCGG 5592192 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||||| || || |||||||| || | |||||||||| | ||| |||||| Sbjct 5592193 CCATCTTCTAATTGCTTACCAGCGAAGATGAGACGTTGCTGGTCCGGAGGGATACCTTCC 5592252 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||| || || || ||| |||| | | || || ||||||||| | || Sbjct 5592253 TTGTCTTGGATCTTGGCCTTAACATTCTCGATAGTATCAGAGGCCTCTACTTCCAAGGTG 5592312 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || ||||||||||| ||||| | ||||| Sbjct 5592313 ATGGTTTTTCCTGTGAGAGTCTTGACGAAAATTTGCAT 5592350 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | ||| |||||||| || || ||||||||||| || | || ||| | ||||| Sbjct 5591910 GAGAACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCTGATAGAGTGCGGCCATC 5591969 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||||| || || |||||||| || | ||||||||| | | ||| |||||||| || Sbjct 5591970 TTCTAATTGCTTACCAGCGAAGATGAGACGCTGCTGGTCTGGAGGGATACCTTCCTTGTC 5592029 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || || ||| | || | | |||| ||| ||| ||||| | || ||||| Sbjct 5592030 TTGGATCTTGGCCTTAACATTTTCGATGGTGTCGGAAGCCTCAACTTCCAAGGTGATAGT 5592089 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| ||||| | ||||| Sbjct 5592090 CTTTCCTGTGAGGGTCTTGACGAAAATTTGCAT 5592122 >seq115 Length=3414097 Score = 118 bits (130), Expect = 2e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGA 151974 |||| || ||||||||||| | || || | ||||||||| | ||| || || || | Sbjct 442547 CTTTCTGAATGTTGTAATCTGATAGTGTGCGCCCATCTTCCAATTGTTTGCCTGCAAAAA 442606 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | | ||||||||||| | | || ||||| || ||||||||||| ||||||| | | Sbjct 442607 TCAATCTCTGCTGGTCAGGAGGAATGCCTTCTTTGTCTTGAATTTTGCTTTTGACATTTT 442666 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | ||||||| ||||||||||||||| || |||||||| || | ||| || || | Sbjct 442667 CGATAGTGTCTGATGCCTCTACTTCAAGAGTGATTGTTTTGCCAGTCAAAGTTTTAACAA 442726 Query 152095 AGACCTGCAT 152104 | | |||||| Sbjct 442727 AAATCTGCAT 442736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153528814468921