Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bemisia_20tabaci_20[refseq_20GCF_5F001854935.1_202016-10-26] 19,751 sequences; 615,017,152 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq20 123 2e-23 seq933 118 8e-22 >seq20 Length=9260020 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| ||||| |||| |||||| || ||| || ||||||||||| || Sbjct 134707 CATACCTCCTCTCAATCTCAGGACCAAGTGAAGTGTAGACTCTTTCTGGATGTTGTAGTC 134648 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || ||| | | || || | |||||| ||||| |||||||||||||| || || | Sbjct 134647 GGAGAGAGTTCTTCCATCTTCTAACTGCTTTCCGGCGAAGATCAAACGCTGTTGGTCAGG 134588 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||||| ||| || || ||| | || ||| | || ||||| | | || Sbjct 134587 GGGAATTCCTTCCTTGTCCTGGAT-TTTTGCCTTAACATTCTCAATTGTGTCTGATGCTT 134529 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || |||| ||||| || || || || || |||||||| || |||||||| Sbjct 134528 CAACTTCCAGGGTAATTGTTTTGCCAGTCAGCGTCTTCACAAAAATTTGCAT 134477 Score = 107 bits (118), Expect = 1e-18 Identities = 172/247 (70%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| ||||| |||| |||||| || ||| |||||||||||||| Sbjct 134482 TTGCATACCTCCTCTCAATCTCAGGACCAAGTGAAGGGTAGACTCTTTTTGGATGTTGTA 134423 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||| ||| | | || || | ||| || ||||| |||||||||||||| || || Sbjct 134422 GTCGGAGAGAGTTCTTCCATCTTCTAACTGTTTGCCGGCGAAGATCAAACGCTGTTGGTC 134363 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | || | |||||||| ||| || || ||||| | | || ||||| | | Sbjct 134362 AGGGGGAATGCCTTCCTTGTCCTGGATTTTTGCCTTCACATTCTCAATTGTGTCTGAAGC 134303 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTG 44343 || || || | || || || || || || | |||||| || || || |||||||||| Sbjct 134302 CTCAACTTCGAGGGTGATGGTTTTCCCTGTTAAGGTCTTGACAAAAATCTGCATGATGTT 134243 Query 44344 AATGAAA 44350 ||||| Sbjct 134242 TCTGAAA 134236 Score = 95.1 bits (104), Expect = 9e-15 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAA 44204 || |||||||||||||| |||| ||||| | | || |||| |||||| || |||| Sbjct 134895 TCTTTTTGGATGTTGTAGTCGGACAGAGTT--CTTCCATCTTCCAACTGCTTGCCAGCAA 134838 Query 44205 AGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG 44264 ||||||||||||| || |||| || | |||||||| ||| || || |||| Sbjct 134837 AGATCAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATTTTGGCTTTCACGT 134778 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 || | || ||||| | || ||| || || | || || || || || || ||||| || | Sbjct 134777 TTTCAATAGTGTCTGAGGCTTCAACTTCTAGAGTGATGGTTTTGCCTGTTAGGGTTTTGA 134718 Query 44325 CGAAGATTTGCAT 44337 | ||||| ||||| Sbjct 134717 CAAAGATCTGCAT 134705 >seq933 Length=6104033 Score = 118 bits (130), Expect = 8e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||| ||| || | ||| || ||| || ||||| |||||||| |||| || ||| Sbjct 5591449 AGTCGCAAAACTAAGTGGAGAGTGGATTCTTTTTGAATGTTGTAGTCGGATAGGGTGCGG 5591508 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || |||| || || || || ||||| | ||| ||||| |||| ||| | ||||||| Sbjct 5591509 CCATCTTCCAATTGTTTACCAGCGAAGATGAGACGTTGCTGGTCTGGAGGGATACCTTCC 5591568 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || || ||||| ||| | | | |||||||| | | ||| ||||||| || Sbjct 5591569 TTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAAGCTTCTACCTCCAAGGTG 5591628 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || |||||||| ||||||||||| ||||| |||||||| Sbjct 5591629 ATAGTCTTTCCTGTGAGGGTCTTGACGAAAATTTGCAT 5591666 Score = 116 bits (128), Expect = 3e-21 Identities = 166/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | |||||| | || | ||||| || || ||||| |||||||| Sbjct 5593257 TTGCATACCACCACGCAGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTA 5593316 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||| | ||| | || || | || || ||||| ||||| | ||| ||||| || Sbjct 5593317 GTCGGATAAGGTGCGGCCATCTTCTAATTGTTTACCGGCGAAGATGAGACGTTGCTGGTC 5593376 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || ||| | ||||||||| || ||||| ||| | | | |||||||| | || Sbjct 5593377 TGGAGGGATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAGGC 5593436 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||||| || || |||||||| ||||||||||| ||||| |||||||| Sbjct 5593437 TTCTACCTCCAAGGTGATGGTCTTTCCTGTGAGGGTCTTGACGAAAATTTGCAT 5593490 Score = 114 bits (126), Expect = 9e-21 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| ||||||||||| || | || ||| | || || | ||||| || || ||| Sbjct 5591932 TCCTTCTGGATGTTGTAGTCTGATAGAGTGCGGCCATCTTCTAATTGCTTACCAGCGAAG 5591991 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || | ||||||||| |||| ||| | ||||||||| || ||||| ||| | || Sbjct 5591992 ATGAGACGCTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGGATCTTGGCCTTAACATTT 5592051 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | |||||||||| | || || |||| || || |||||||| ||||||||||| ||| Sbjct 5592052 TCGATGGTGTCGGAAGCCTCAACTTCCAAGGTGATAGTCTTTCCTGTGAGGGTCTTGACG 5592111 Query 44327 AAGATTTGCAT 44337 || |||||||| Sbjct 5592112 AAAATTTGCAT 5592122 Score = 107 bits (118), Expect = 1e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | |||||| | || | ||||| || || ||||| |||||||| Sbjct 5593713 TTGCATACCACCACGCAGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTA 5593772 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||| | ||| | || || | || || ||||| ||||| | ||| ||||| || Sbjct 5593773 GTCGGATAAGGTGCGGCCATCTTCTAATTGTTTACCGGCGAAGATGAGACGTTGCTGGTC 5593832 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || ||| | ||||||||| || ||||| ||| | || | |||||||||| | Sbjct 5593833 TGGAGGGATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCGATGGTGTCGGAAGC 5593892 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||| || || |||||||| ||||||||||| || || |||||||| Sbjct 5593893 CTCAACTTCCAAAGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAAATTTGCAT 5593946 Score = 105 bits (116), Expect = 5e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| |||||||||||||| | || || | || ||||| || || || || ||| Sbjct 5592616 TCCTTCTGGATGTTGTAATCAGAAAGAGTACGGCCATCTTCCAGTTGTTTACCAGCGAAG 5592675 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || | ||| ||||| |||| ||| | ||||||||| || ||||| || | || || Sbjct 5592676 ATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGGATCTT-GGCCTTAACATT 5592734 Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | |||||||| | | || || |||| ||||| || ||||| ||||| ||||| || Sbjct 5592735 CTCGATGGTGTCAGAAGCCTCAACTTCCAAGGTAATGGTTTTTCCTGTGAGAGTCTTGAC 5592794 Query 44326 GAAGATTTGCAT 44337 ||| |||||||| Sbjct 5592795 GAAAATTTGCAT 5592806 Score = 105 bits (116), Expect = 5e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| ||||||||||| || | || ||| | || || | ||||| || || ||| Sbjct 5593984 TCCTTCTGGATGTTGTAGTCTGATAGAGTGCGGCCATCTTCTAATTGCTTACCAGCGAAG 5594043 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || | ||| ||||| |||| ||| | ||||||||| || ||||| ||| | | Sbjct 5594044 ATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTC 5594103 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | |||||||| | || ||| ||||||| || || |||||||| || || ||||| ||| Sbjct 5594104 TCGATGGTGTCAGAGGCTTCTACCTCCAAGGTGATAGTCTTTCCGGTTAGTGTCTTGACG 5594163 Query 44327 AAGATTTGCAT 44337 ||||| ||||| Sbjct 5594164 AAGATCTGCAT 5594174 Score = 100 bits (110), Expect = 2e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| |||||||||||||| | || || | || ||||| || || || || ||| Sbjct 5592388 TCCTTCTGGATGTTGTAATCAGAAAGAGTACGGCCATCTTCCAGTTGTTTACCAGCGAAG 5592447 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || | ||| ||||| |||| ||| | ||||||||| || ||||| || | || || Sbjct 5592448 ATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGGATCTT-GGCCTTAACATT 5592506 Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | |||||||| | | || || |||| || || || ||||| ||||| ||||| || Sbjct 5592507 CTCGATGGTGTCAGAAGCCTCAACTTCCAAGGTGATGGTTTTTCCTGTGAGAGTCTTGAC 5592566 Query 44326 GAAGATTTGCAT 44337 ||| |||||||| Sbjct 5592567 GAAAATTTGCAT 5592578 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | |||||| | || | ||||| || || ||||| |||||||| Sbjct 5591661 TTGCATACCACCACGCAGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTA 5591720 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | | ||| | || |||| || || || || ||||| | ||| ||||| || Sbjct 5591721 ATCTGATAAGGTGCGGCCATCTTCCAATTGTTTACCAGCGAAGATGAGACGTTGCTGGTC 5591780 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 | ||| | ||||||||| || ||||| ||| | | | ||||| |||| || Sbjct 5591781 CGGAGGGATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCAATGGTATCGGAGGC 5591840 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||| || || |||||||| || |||||||| ||||| |||||||| Sbjct 5591841 CTCAACTTCCAAGGTGATGGTCTTTCCAGTAAGGGTCTTGACGAAAATTTGCAT 5591894 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||| |||||||| ||||| | || || | || ||||| || || || || ||| Sbjct 5592844 TCCTTCTGGATGTTATAATCAGAAAGGGTACGGCCATCTTCCAGTTGTTTACCAGCGAAG 5592903 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || | ||| ||||| || | ||| | ||||||||| || ||||| ||| | | Sbjct 5592904 ATGAGACGTTGCTGGTCCGGAGGGATACCTTCCTTGTCTTGGATCTTGGCCTTGACATTC 5592963 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | ||||| |||| || || || |||| || || |||||||| ||||||||||| || Sbjct 5592964 TCGATGGTATCGGAGGCCTCGACTTCCAAGGTGATGGTCTTTCCTGTGAGGGTCTTGACA 5593023 Query 44327 AAGATTTGCAT 44337 || |||||||| Sbjct 5593024 AAAATTTGCAT 5593034 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 || ||||| |||||||| || | | ||| | || || | || || || || ||| Sbjct 5593072 TCTTTTTGAATGTTGTAGTCTGATAAGGTGCGGCCATCTTCTAATTGTTTACCAGCGAAG 5593131 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || | ||| ||||| |||| ||| | ||||||||| || ||||| ||| | || Sbjct 5593132 ATGAGACGTTGCTGGTCTGGAGGGATACCTTCCTTGTCTTGAATCTTAGCCTTAACATTT 5593191 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | ||||| |||| || || || |||| || || |||||||| ||||||||||| || Sbjct 5593192 TCAATGGTATCGGAGGCCTCAACTTCCAAGGTGATGGTCTTTCCAGTGAGGGTCTTGACA 5593251 Query 44327 AAGATTTGCAT 44337 || |||||||| Sbjct 5593252 AAAATTTGCAT 5593262 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | |||||| | || | ||||| || || ||||| |||||||| Sbjct 5593485 TTGCATACCACCACGCAGTCTGAGAACTAAATGAAGAGTTGATTCTTTTTGAATGTTGTA 5593544 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | | ||| | || || | || || || || ||||| | ||| ||||| || Sbjct 5593545 GTCTGATAAGGTGCGGCCATCTTCTAATTGTTTACCAGCGAAGATGAGACGTTGCTGGTC 5593604 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || ||| | ||||||||| || ||||| ||| | || | ||||| |||| || Sbjct 5593605 TGGAGGGATACCTTCCTTGTCTTGAATCTTAGCCTTAACATTTTCAATGGTATCGGAGGC 5593664 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||| || || || || || ||||||||||| || || |||||||| Sbjct 5593665 CTCAACTTCCAAGGTGATGGTTTTCCCTGTGAGGGTCTTGACAAAAATTTGCAT 5593718 Score = 87.8 bits (96), Expect = 1e-12 Identities = 162/235 (69%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || || | |||||| | || | || || || ||||| ||||||||||| Sbjct 5592117 TTGCATACCACCACGCAGTCTGAGAACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTA 5592176 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | || ||| | || || | ||||| || || ||||| | ||| ||||| || Sbjct 5592177 GTCTGATAGAGTGCGGCCATCTTCTAATTGCTTACCAGCGAAGATGAGACGTTGCTGGTC 5592236 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 | ||| | ||||||||| || ||||| || | || ||| | || || || | || Sbjct 5592237 CGGAGGGATACCTTCCTTGTCTTGGATCTT-GGCCTTAACATTCTCGATAGTATCAGAGG 5592295 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||| || || || ||||| ||||| ||||| ||||| |||||||| Sbjct 5592296 CCTCTACTTCCAAGGTGATGGTTTTTCCTGTGAGAGTCTTGACGAAAATTTGCAT 5592350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359903744798367