Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_001609.1 Length=11624 Score E Sequences producing significant alignments: (Bits) Value seq15780 98.7 7e-17 >seq15780 Length=3455 Score = 98.7 bits (108), Expect = 7e-17 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 2715 ATAATCAGCCCACCACTGCATCATTAAACGCCGCTCATCCAAATGCTCGGAGGTATGGAT 2774 ||||||| |||||||||||| ||| | ||| || || | |||| || |||| || Sbjct 437 ATAATCACTCCACCACTGCATAATTTTAACCCGTTCGTCTAGGTGCTTGGCTTTATGTAT 378 Query 2775 ATATGCCGCACGTACATTATTACGCTCTGAGTGGCTCAGTTGCCTCTCTATCGCGTCATC 2834 ||| || || | ||| || || | ||| |||||||| ||| | ||||| ||||| || Sbjct 377 ATAAGCTGCTCTTACTTTGTTTCTTTCTACGTGGCTCATTTGGCGTTCTATTGCGTCCTC 318 Query 2835 ACTCCATAACCCCGACTCCCCCAACGCACCACGCGCCATAGTCCTAAACCCATGCCCACA 2894 || ||| || | || || |||| || ||||||| ||||| |||||||| || Sbjct 317 GCTAAATAGTCCGCATTCGATTAATGCACTACAAGCCATAGCTCTAAAACCATGCCCGCA 258 Query 2895 CACCTCGGTTTTAGTATCATAGCC 2918 || || ||||| |||| ||||| Sbjct 257 TACTTCCGTTTTGGTATTGTAGCC 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37071257570944