Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_001884.1 Length=134416 Score E Sequences producing significant alignments: (Bits) Value seq3213 118 9e-22 >seq3213 Length=2170589 Score = 118 bits (130), Expect = 9e-22 Identities = 213/304 (70%), Gaps = 8/304 (3%) Strand=Plus/Plus Query 32674 TAGTTGGCCATGAT-CTTCTTGACGTAATTCTGTGTTTCTTTAAAAGGAGGGATACCACC 32732 || || |||| || ||||| ||| ||||| |||||||||||| |||| || | ||| | Sbjct 1083859 TAATTAGCCAAAATGCTTCT-GACATAATTTTGTGTTTCTTTATAAGGTGGAACACCGTC 1083917 Query 32733 ATATTTAATTACGTTACCAGGCCCAGCATTATATGCAGCCAATGCTTTTTCAACATTACC 32792 |||||| || ||| || || ||||| || || || | ||| |||||||| Sbjct 1083918 ATATTTGTCGACAGCACCGGGACCTGCATTGTAAGCTGCAAGCGCTAAAATTACATTACC 1083977 Query 32793 GCCAAACTTTTCAAG--TTGTTGGGCGAGGTACTTTGTTCCACCCATA-ACATTTTGATA 32849 | | | || | ||| ||| | | || | || | |||| || |||||| Sbjct 1083978 GTTATATTTGTTAAGCATTGATTTTAAA--TA-TCTGACACCGCCATCTACGTTTTGAAC 1084034 Query 32850 AGGATCGTAAGCGTTATTTACTCCTAAGCTTTTTGCTGTTGCTGGCATCAGTTGCATTAA 32909 ||||| ||||| | | |||| ||||| | |||||||||||| ||||||| |||||| || Sbjct 1084035 AGGATTATAAGCATCAGTTACCCCTAAACCTTTTGCTGTTGCCGGCATCAATTGCATCAA 1084094 Query 32910 TCCCATGGCACCTACACCAGATCGTGCTTTAGCATTAAACCCTGATTCTTGCTGAATTAC 32969 |||||| |||||| | ||| |||||||| |||||| || |||||||| | || || Sbjct 1084095 TCCCATTGCACCTGCGTGCGATTTTGCTTTAGGATTAAATCCGGATTCTTGTTTGATAAC 1084154 Query 32970 AGCT 32973 ||| Sbjct 1084155 CGCT 1084158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429876472491224