Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq783 87.8 1e-12 >seq783 Length=580412 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 |||||| || || | || || | || ||||||||||| || ||| || || | Sbjct 389900 AATGCAGATTTTTGTGAAGACTCTTACTGGCAAAACCATCACTCTAGAAGTTGAGGCCTC 389959 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 ||| || | | || |||| || ||| ||||| ||||| | ||| ||| || Sbjct 389960 AGACACAATCGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGCATTCCCCCAGACCA 390019 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 ||| ||| | |||||||| ||||| || | |||||| ||| || |||| ||||| Sbjct 390020 ACAGAGATTGATCTTTGCCGGCAAGCAGCTTGAAGATGGACGAACCCTGTCCGACTACAA 390079 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||| |||||||| ||||| | ||||| ||| | || || || Sbjct 390080 CATTCAAAAAGAATCTACACTTCATCTTGTGTTGCGACTTCGTGGTGG 390127 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || ||| |||| || ||||| ||||||||||| || ||| || | || Sbjct 391125 ATGCAGATTTTCGTCAAGACTTTGACTGGCAAAACCATCACTTTGGAAGTTGAGGCTTCA 391184 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | || |||||| ||||| || || | || |||||| Sbjct 391185 GACACAATCGAAAATGTGAAAGCCAAAATTCAGGATAAGGAGGGCATTCCTCCAGATCAG 391244 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || | ||||||||||| || |||||| | |||||| ||| || | || ||||| Sbjct 391245 CAGCGTCTTATCTTTGCTGGTAAACAACTTGAAGATGGACGAACCCTGTCTGACTACAAC 391304 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244 ||||| |||||||| ||||| ||| ||||| Sbjct 391305 ATTCAGAAGGAATCCACTCTCCACTTGGTG 391334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410672676719888