Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq2315 105 7e-18
seq783 105 7e-18
seq714 96.9 4e-15
seq779 82.4 8e-11
>seq2315
Length=138946
Score = 105 bits (116), Expect = 7e-18
Identities = 136/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| ||||| || || || ||||| |||||||||||||| | || || ||| | |
Sbjct 28022 ATGCAGATATTTGTGAAGACCCTCACAGGCAAAACCATCACACTGGAGGTAGAACCATCT 28081
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | ||| | |||| |||||||| |||||||| || ||||| | || |||
Sbjct 28082 GATACCATTGAAAATGTAAAGGCAAAAATTCAAGACAAAGAAGGAATCCCACCAGATCAG 28141
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| ||| | || | || ||||||||| |||| || | ||||| || ||||||||
Sbjct 28142 CAGCGATTAATTTTTGCAGGCAAACAGTTGGAAGATGGTCGCACACTGTCGGACTACAAT 28201
Query 40870 ATCCAGAA 40877
||||| ||
Sbjct 28202 ATCCAAAA 28209
Score = 95.1 bits (104), Expect = 1e-14
Identities = 135/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| ||||| || || || ||||| || ||||||||||| | || || ||| | |
Sbjct 27520 ATGCAGATATTTGTGAAGACCCTCACAGGAAAAACCATCACACTGGAGGTAGAACCATCT 27579
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | ||| | |||| ||| |||| |||||||| || ||||| | || |||
Sbjct 27580 GATACCATTGAAAATGTAAAGGCAAAGATTCAAGACAAAGAAGGAATCCCACCAGATCAG 27639
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| ||| | || | || ||||||||| |||| || | ||||| || ||||||||
Sbjct 27640 CAGCGATTAATTTTTGCAGGCAAACAGTTGGAAGATGGTCGCACACTGTCGGACTACAAT 27699
Query 40870 ATCCAGAAGG 40879
|| || ||||
Sbjct 27700 ATTCAAAAGG 27709
Score = 95.1 bits (104), Expect = 1e-14
Identities = 135/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| ||||| || || || ||||| || ||||||||||| | || || ||| | |
Sbjct 28961 ATGCAGATATTTGTGAAGACCCTCACAGGAAAAACCATCACACTGGAGGTAGAACCATCT 29020
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | ||| | |||| ||| |||| |||||||| || ||||| | ||||||
Sbjct 29021 GATACCATTGAAAATGTAAAGGCAAAGATTCAAGACAAAGAAGGAATCCCACCAGACCAG 29080
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| ||| | || | || || |||||| |||| || | ||||| || ||||||||
Sbjct 29081 CAGCGATTAATTTTTGCAGGAAAACAGTTGGAAGATGGCCGCACACTGTCGGACTACAAT 29140
Query 40870 ATCCAGAAGG 40879
|| || ||||
Sbjct 29141 ATTCAAAAGG 29150
Score = 82.4 bits (90), Expect = 8e-11
Identities = 131/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || ||||| || || || |||||||| ||| | || || ||| | |
Sbjct 26778 ATGCAGATTTTTGTGAAAACTCTTACTGGTAAAACCATAACCCTTGAGGTGGAACCATCT 26837
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | | || | |||||||| ||||||||||| || || | || |||
Sbjct 26838 GATACCATTGAGAATGTAAAAGCAAAAATTCAAGACAAAGAGGGGATTCCTCCTGATCAG 26897
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | || | ||| || ||||||||||| || | ||||| || ||||| |||
Sbjct 26898 CAGAGATTGATTTTCGCAGGGAAACAGCTGGAAGATGGACGCACACTTTCAGACTATAAC 26957
Query 40870 ATCCAGAA 40877
|| || ||
Sbjct 26958 ATTCAAAA 26965
>seq783
Length=580412
Score = 105 bits (116), Expect = 7e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| || || || || || || || |||||||||||||| | || || || ||| |
Sbjct 389900 AATGCAGATTTTTGTGAAGACTCTTACTGGCAAAACCATCACTCTAGAAGTTGAGGCCTC 389959
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | ||| |||| | || |||| || || || ||||| ||| | |||||
Sbjct 389960 AGACACAATCGAAAATGTCAAAGCCAAGATTCAGGATAAGGAAGGCATTCCCCCAGACCA 390019
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || | |||| || ||||| ||||| || || | || ||||| |||||||||
Sbjct 390020 ACAGAGATTGATCTTTGCCGGCAAGCAGCTTGAAGATGGACGAACCCTGTCCGACTACAA 390079
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||| || || || | || || ||||| ||||||||
Sbjct 390080 CATTCAAAAAGAATCTACACTTCATCTTGTGTTGCG 390115
Score = 91.5 bits (100), Expect = 2e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || | || |||||||||||||| | || || || || |
Sbjct 391125 ATGCAGATTTTCGTCAAGACTTTGACTGGCAAAACCATCACTTTGGAAGTTGAGGCTTCA 391184
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | ||| | || | ||||||| || || |||||||| || | || |||
Sbjct 391185 GACACAATCGAAAATGTGAAAGCCAAAATTCAGGATAAGGAGGGCATTCCTCCAGATCAG 391244
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| || || ||||| || || || | || ||||| |||||||||
Sbjct 391245 CAGCGTCTTATCTTTGCTGGTAAACAACTTGAAGATGGACGAACCCTGTCTGACTACAAC 391304
Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892
|| |||||||| |||| || ||
Sbjct 391305 ATTCAGAAGGAATCCACTCTCCA 391327
Score = 82.4 bits (90), Expect = 8e-11
Identities = 133/189 (70%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || || ||||| |||||| | || || ||||| |
Sbjct 387058 ATGCAGATTTTCGTGAAGACCCTGACAGGGAAAACTATCACCCTAGAAGTTGAAGCTTCA 387117
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| | |||| || |||| ||||||||||| || || | |||||
Sbjct 387118 GATACCATTGAGAACG-TGAAGGCTAAGATTCAAGACAAAGAGGGAATTCCTCCAGACCA 387176
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || | |||| || |||||||| |||| |||| | || || ||||||||
Sbjct 387177 ACAGAGATTAATCTTTGCTGGCAAACAATTGGAAGACGGAAGAACGCTGTCAGACTACAA 387236
Query 40869 CATCCAGAA 40877
|| |||||
Sbjct 387237 TATACAGAA 387245
Score = 82.4 bits (90), Expect = 8e-11
Identities = 133/189 (70%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| || || || ||||||||||| | || ||||| || |
Sbjct 390357 ATGCAGATTTTCGTGAAAACCCTTACTGGTAAAACCATCACTTTGGAAGTCGAGGCTTCA 390416
Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | ||||| | || | || |||| ||||| || ||||| ||| | |||||
Sbjct 390417 GACACGATCGAAAACG-TTAAAGCCAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCA 390475
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || | |||| || ||||| ||||| || || | | || || ||||||||
Sbjct 390476 ACAGAGATTGATCTTTGCTGGCAAGCAGCTAGAGGATGGAAGGACTCTGTCAGACTACAA 390535
Query 40869 CATCCAGAA 40877
|| |||||
Sbjct 390536 TATTCAGAA 390544
>seq714
Length=734366
Score = 96.9 bits (106), Expect = 4e-15
Identities = 158/225 (70%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 116944 TTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCG 117003
||| || || || || || || |||||||| || ||| |||| || || ||||| || |
Sbjct 44125 TTTATTTAATGCTATTGAAACAATGCCGTGTGTAAAAAAGAAAGCAGATTGGGCCCTTCA 44066
Query 117004 CTGGATCGCCGGCAGAGAG-GCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCG 117062
||||| || || | || | | |||||| | |||| || || || || || |
Sbjct 44065 GTGGATTGCAAAT-GATACTGCAACATATGGCGAGAGAGTGGTAGCATTTGCTGCAGTGG 44007
Query 117063 AGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCA 117122
|||| | ||||| || || || || || | || || ||||| |||||| | || || |
Sbjct 44006 AGGGTATTTTCTTCTCCGGGAGCTTTGCTTCAATTTTCTGGCTGAAGAAAAGAGGACTTA 43947
Query 117123 TGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167
|||| || |||||||||||||||| | || || ||||| ||||
Sbjct 43946 TGCCAGGATTGACTTTCAGCAACGAATTGATTTCAAGGGATGAGG 43902
>seq779
Length=683570
Score = 82.4 bits (90), Expect = 8e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 40792 GGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGC 40851
|| || ||| | ||||||||||| || |||| || ||||| ||||| || || | |||
Sbjct 345901 GGTATTCCCCCAGACCAGCAACGTCTGATCTTTGCCGGCAAGCAGCTTGAAGATGGCCGC 345960
Query 40852 ACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGG 40911
|| | |||||||| |||||||| ||| | || || ||||| ||| | ||||||||
Sbjct 345961 ACTTTGTCAGACTACAATATCCAGAAAGAGTCGACTCTTCATCTGGTGCTTCGCTTGAGA 346020
Query 40912 GGCGG 40916
|| ||
Sbjct 346021 GGTGG 346025
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515059533569920
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