Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02] 24,792 sequences; 2,037,201,033 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq495 127 1e-24 seq373 84.2 2e-11 >seq495 Length=1347633 Score = 127 bits (140), Expect = 1e-24 Identities = 240/348 (69%), Gaps = 4/348 (1%) Strand=Plus/Plus Query 97110 TAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGG 97169 |||| |||| | | ||| | |||||| ||||| | | ||| || |||| || || || Sbjct 721653 TAAACCAGTTAATTTGGCAACCATACATGTTAACAATGCATAACTTGCAACATTGAATGG 721712 Query 97170 CACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACA 97229 || |||| |||||||||||| || | ||| |||||||| || ||||||| | | Sbjct 721713 TACACCTAATCCCATATCAGCAGAACGTTGGTATAACTGGCAAGAAAGCTCTTTGCCTGC 721772 Query 97230 CACATAAAACTGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGA 97288 ||||| |||||| | | ||| ||||| || || | |||||||| || | ||| | Sbjct 721773 TACATAGAACTGA-ACGAGACAGTGACATGGTGGGAGAGCCATTTTAGGTATATCAACTG 721831 Query 97289 CATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTA 97348 ||||||||||| ||| | || | | ||| || || | | || | | ||| | Sbjct 721832 GATTCCAAGCACTCATGATAATACGACGATCATCAGGCTTGTTCTTGATAATTTCAATCA 721891 Query 97349 TCTGCTTTAATTGATCAACGCCTTCTCCACCATAAT-TGTGCTTAAGACCTTGATATTCT 97407 || |||||||||| ||| | |||| ||||| ||| ||| | | ||| || | Sbjct 721892 CGCGCAACAATTGATCAATGCCCTGTCCAGAATAATCTGT-CTTTATATCTTTGTACTTA 721950 Query 97408 GCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCT 97455 |||||||| |||| |||||| |||||||| || || || || || ||| Sbjct 721951 GCTCCAAAGTGCCGCCATTGAAATCCATACACTGGACCTAGATCACCT 721998 >seq373 Length=1274844 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 97138 GTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTT 97197 || |||| | ||| |||||||| ||||| || || || || ||||||||||| | Sbjct 929525 GTCAATAATGCATAACTAGCAATATTAAAGGGAACACCAAGGAAAATATCAGCTGAACGC 929466 Query 97198 TGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGACTCAATACATGACAG 97257 |||||||||||||| || || |||||||| ||||||||| || || |||| || Sbjct 929465 TGATATAACTGACATGATAGTTTTCCATCTGCCACATAAAATTGGAATAAGGCATGGCAA 929406 Query 97258 GGGGGCAACGCCATTT 97273 || || | ||||||| Sbjct 929405 GGTGGTAGTGCCATTT 929390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346679218347440