Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Blattella_20germanica_20[genbank_20GCA_5F000762945.1_202014-10-02]
24,792 sequences; 2,037,201,033 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq39 158 2e-33
seq1206 122 1e-22
seq242 104 3e-17
seq3439 100 4e-16
seq783 100 4e-16
seq2315 98.7 1e-15
seq123 96.9 5e-15
>seq39
Length=3240425
Score = 158 bits (174), Expect = 2e-33
Identities = 146/185 (79%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 95329 AAAATGTCACTTAATAATATATGTTATGAACACATTAAAGACTCATATTATTATGGTCTA 95388
|| ||||| || || ||| ||||||||||||| || |||||| |||| ||||||||
Sbjct 2060469 AACATGTCTCTCAACAATGTATGTTATGAACAAATCAAAGACCAGTATTGGTATGGTCTC 2060410
Query 95389 TTTGGTGATTTTAAATTAGTTATAGATAAAACTACAGGTTGTTTTAATGCTACTAAATTA 95448
||||| |||||||| || ||||||||||| | || || |||||||||||||||||||||
Sbjct 2060409 TTTGGAGATTTTAATTTGGTTATAGATAAGTCGACTGGATGTTTTAATGCTACTAAATTA 2060350
Query 95449 TGTAATTTAGGTGGTAAACAATATAGAGATTGGAAACGTTTAGAAAAATCTAAAGAACTT 95508
||| || || ||||||| || |||| | |||| || |||||||| ||| |||||
Sbjct 2060349 TGTCATAGTGGCGGTAAACGATTTAGAAACTGGATGCGATTAGAAAACAGCAAACAACTT 2060290
Query 95509 ATAAA 95513
|| ||
Sbjct 2060289 ATCAA 2060285
Score = 150 bits (166), Expect = 3e-31
Identities = 168/222 (76%), Gaps = 3/222 (1%)
Strand=Plus/Minus
Query 96449 AAAATGTCTTTAATTGATGTATGTTATGAACACATCAAAGACTCATATTATTATGGTTTA 96508
|| |||||| | | |||||||||||||||| ||||||||| |||| |||||| |
Sbjct 2060469 AACATGTCTCTCAACAATGTATGTTATGAACAAATCAAAGACCAGTATTGGTATGGTCTC 2060410
Query 96509 TTTGGTGATTTTAAATTAGTTATAGATAAAACCACAGGTTGTTTTAATGCTACTAAATTA 96568
||||| |||||||| || ||||||||||| | || || |||||||||||||||||||||
Sbjct 2060409 TTTGGAGATTTTAATTTGGTTATAGATAAGTCGACTGGATGTTTTAATGCTACTAAATTA 2060350
Query 96569 TGTAATTTATCAGGAAAAAGATTTAGAAATTGGATTAGATTAGATAGATCTAAACAA-TT 96627
||| || || ||| |||||||||| ||||| ||||||| | |||||| ||
Sbjct 2060349 TGTCATAGTGGCGGTAAACGATTTAGAAACTGGATGCGATTAGAAAACAGCAAACAACTT 2060290
Query 96628 ATTAA--AATATATGGAGAATTACCGAAGCTCATATGTGAGC 96667
|| || | |||| || || | | |||||| ||||||||
Sbjct 2060289 ATCAAGTATTATAAAGAAAAATTAGGTAGCTCAGATGTGAGC 2060248
Score = 140 bits (154), Expect = 5e-28
Identities = 131/167 (78%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 25916 AAAATGTCTTTAATTGATGTGTGTTATGAACACATTAAAGACTCATATTATTATGGTCTC 25975
|| |||||| | | |||| ||||||||||| || |||||| |||| |||||||||
Sbjct 2060469 AACATGTCTCTCAACAATGTATGTTATGAACAAATCAAAGACCAGTATTGGTATGGTCTC 2060410
Query 25976 TTTGGTGATTTTAAATTAGTTATAGATAAAACAACAGGTTGTTTTAATGCTACTAAGTTA 26035
||||| |||||||| || ||||||||||| | || || ||||||||||||||||| |||
Sbjct 2060409 TTTGGAGATTTTAATTTGGTTATAGATAAGTCGACTGGATGTTTTAATGCTACTAAATTA 2060350
Query 26036 TGTAATTTAGGTGGTAAAAAATTTAAACAATGGAAACGTTTAGAAAA 26082
||| || || |||||| ||||| | | |||| || ||||||||
Sbjct 2060349 TGTCATAGTGGCGGTAAACGATTTAGAAACTGGATGCGATTAGAAAA 2060303
>seq1206
Length=549353
Score = 122 bits (134), Expect = 1e-22
Identities = 103/124 (83%), Gaps = 2/124 (2%)
Strand=Plus/Plus
Query 95332 ATGTCACTTAATAATATATGTTATGAACACATTAAAGACTCA-TATTATTATGGTCTATT 95390
||||| ||||||||| |||||||| |||| || ||||| ||| |||| |||||||| ||
Sbjct 366373 ATGTCTCTTAATAATTTATGTTATAAACAAATCAAAGA-TCAGTATTGGTATGGTCTCTT 366431
Query 95391 TGGTGATTTTAAATTAGTTATAGATAAAACTACAGGTTGTTTTAATGCTACTAAATTATG 95450
||| | ||||| | || |||||||| |||| ||||||||||||||||| ||||||||
Sbjct 366432 TGGAAAATTTAATCTGGTCATAGATAAGTCTACTGGTTGTTTTAATGCTACCAAATTATG 366491
Query 95451 TAAT 95454
||||
Sbjct 366492 TAAT 366495
Score = 104 bits (114), Expect = 3e-17
Identities = 99/124 (80%), Gaps = 2/124 (2%)
Strand=Plus/Plus
Query 96452 ATGTCTTTAATTGATGTATGTTATGAACACATCAAAGACTCA-TATTATTATGGTTTATT 96510
|||||| | | | || |||||||| |||| |||||||| ||| |||| |||||| | ||
Sbjct 366373 ATGTCTCTTAATAATTTATGTTATAAACAAATCAAAGA-TCAGTATTGGTATGGTCTCTT 366431
Query 96511 TGGTGATTTTAAATTAGTTATAGATAAAACCACAGGTTGTTTTAATGCTACTAAATTATG 96570
||| | ||||| | || |||||||| | || ||||||||||||||||| ||||||||
Sbjct 366432 TGGAAAATTTAATCTGGTCATAGATAAGTCTACTGGTTGTTTTAATGCTACCAAATTATG 366491
Query 96571 TAAT 96574
||||
Sbjct 366492 TAAT 366495
Score = 100 bits (110), Expect = 4e-16
Identities = 117/153 (76%), Gaps = 5/153 (3%)
Strand=Plus/Plus
Query 25892 TATAAATATAATTAAAAATTATATAAA--ATGTCTTTAATTGATGTGTGTTATGAACACA 25949
||| |||| ||| ||| | | | ||| |||||| | | | || | |||||| |||| |
Sbjct 366345 TATTAATA-AATCAAACACTTAACAAATCATGTCTCTTAATAATTTATGTTATAAACAAA 366403
Query 25950 TTAAAGACTCA-TATTATTATGGTCTCTTTGGTGATTTTAAATTAGTTATAGATAAAACA 26008
| ||||| ||| |||| |||||||||||||| | ||||| | || |||||||| |
Sbjct 366404 TCAAAGA-TCAGTATTGGTATGGTCTCTTTGGAAAATTTAATCTGGTCATAGATAAGTCT 366462
Query 26009 ACAGGTTGTTTTAATGCTACTAAGTTATGTAAT 26041
|| ||||||||||||||||| || |||||||||
Sbjct 366463 ACTGGTTGTTTTAATGCTACCAAATTATGTAAT 366495
>seq242
Length=1788442
Score = 104 bits (114), Expect = 3e-17
Identities = 128/183 (70%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155
||||||||||| || || |||| | ||| |||| || ||||||||||||||||||||
Sbjct 1569958 ATATTATAATCAGAGAGTGTTCGTCCATCCTCTAGCTGCTTTCCAGCAAAAATCAATCTC 1569899
Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTA 146215
|| ||||| ||||| || ||||| || ||||| ||||
Sbjct 1569898 TGTTGATCAGGAGGGATGCCTTCCTTGTCTTGGATTTTGGCTTTCACATTTTCAATAGTA 1569839
Query 146216 TCTGAACTTTCTACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGC 146275
|| || ||| || || || || ||||||||||| ||||| ||||| | |||||| |||
Sbjct 1569838 TCAGAGGCTTCAACCTCGAGGGTAATTGTTTTACCCGTTAAAGTTTTCACGAATATCTGC 1569779
Query 146276 ATT 146278
|||
Sbjct 1569778 ATT 1569776
>seq3439
Length=31086
Score = 100 bits (110), Expect = 4e-16
Identities = 98/126 (78%), Gaps = 3/126 (2%)
Strand=Plus/Minus
Query 25931 GATGTGTGTTATGAACACATTAAAGACTCATATTATTATGGTCTCTTTGGTGATTTTAAA 25990
||||| ||||||||||| || ||||| ||| | |||||||||||||| |||||||||
Sbjct 10599 GATGTATGTTATGAACAAATCAAAGATCAATACTGGTATGGTCTCTTTGGAGATTTTAAA 10540
Query 25991 TTAGTTATAGATAAAACAACAGGTTGTTTTAATGCTACTAAGTTATGTAATTTAGGTGGT 26050
| || ||||||||| | || || | || |||||||| ||| ||||| | | ||||
Sbjct 10539 CTGGTCATAGATAAATCTACTGGATACTTCAATGCTACGAAGCTATGTCA---GGCTGGT 10483
Query 26051 AAAAAA 26056
||||||
Sbjct 10482 AAAAAA 10477
Score = 95.1 bits (104), Expect = 2e-14
Identities = 93/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 95332 ATGTCACTTAATAATATATGTTATGAACACATTAAAGACTCATATTATTATGGTCTATTT 95391
|| || ||||| || ||||||||||||| || ||||| ||| | |||||||| |||
Sbjct 10611 ATATCTCTTAACGATGTATGTTATGAACAAATCAAAGATCAATACTGGTATGGTCTCTTT 10552
Query 95392 GGTGATTTTAAATTAGTTATAGATAAAACTACAGGTTGTTTTAATGCTACTAAATTATGT 95451
|| ||||||||| | || ||||||||| |||| || | || |||||||| || |||||
Sbjct 10551 GGAGATTTTAAACTGGTCATAGATAAATCTACTGGATACTTCAATGCTACGAAGCTATGT 10492
Score = 91.5 bits (100), Expect = 2e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 96464 GATGTATGTTATGAACACATCAAAGACTCATATTATTATGGTTTATTTGGTGATTTTAAA 96523
||||||||||||||||| |||||||| ||| | |||||| | ||||| |||||||||
Sbjct 10599 GATGTATGTTATGAACAAATCAAAGATCAATACTGGTATGGTCTCTTTGGAGATTTTAAA 10540
Query 96524 TTAGTTATAGATAAAACCACAGGTTGTTTTAATGCTACTAAATTATGT 96571
| || ||||||||| | || || | || |||||||| || |||||
Sbjct 10539 CTGGTCATAGATAAATCTACTGGATACTTCAATGCTACGAAGCTATGT 10492
>seq783
Length=580412
Score = 100 bits (110), Expect = 4e-16
Identities = 136/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 146095 TATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCT 146154
|||||| || ||||| || ||||| | || || |||||||| |||||||| || |||||
Sbjct 387240 TATATTGTAGTCTGACAGCGTTCTTCCGTCTTCCAATTGTTTGCCAGCAAAGATTAATCT 387181
Query 146155 TTGCTGATCCGGAGGAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGT 146214
|| || || ||||||||||| ||||| ||||| ||
Sbjct 387180 CTGTTGGTCTGGAGGAATTCCCTCTTTGTCTTGAATCTTAGCCTTCACGTTCTCAATGGT 387121
Query 146215 ATCTGAACTTTCTACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTG 146274
||||||| ||| |||||||| ||||| ||||| ||||| | || || | ||| || ||
Sbjct 387120 ATCTGAAGCTTCAACTTCTAGGGTGATAGTTTTCCCTGTCAGGGTCTTCACGAAAATCTG 387061
Query 146275 CATTTTATTAGAAAAATA 146292
||| | || ||||| ||
Sbjct 387060 CATCCTGTTTGAAAATTA 387043
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||| | |||||| | || | ||| | ||||||||||| || || |||||||||
Sbjct 390355 CCACCACGAAGTCTCAGCACAAGATGGAGTGTAGATTCTTTCTGAATGTTGTAATCTGAA 390296
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
||||||| || || || | || || |||||||| |||||||| || || || || |||
Sbjct 390295 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCAGCAAAGATCAATCTCTGTTGGTCTGGGGGA 390236
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || || ||
Sbjct 390235 ATGCCTTCCTTGTCCTG 390219
>seq2315
Length=138946
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||||| || | | |||||||| | |||||| ||||| ||||| |||||||||
Sbjct 33219 CCACCTCGCAGACGGAGAACCAAATGCAGAGTAGACTCTTTCTGAATATTGTAATCTGAA 33160
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || | | ||| || | ||||| ||||||||||| | ||| ||||| || |||||
Sbjct 33159 AGTGTGCGACCATCCTCGAGCTGTTTGCCAGCAAAAATGAGTCTCTGCTGGTCTGGAGGG 33100
Query 146171 ATTCCTTCTTTATCTTG 146187
||||| || ||||||||
Sbjct 33099 ATTCCCTCCTTATCTTG 33083
>seq123
Length=2135277
Score = 96.9 bits (106), Expect = 5e-15
Identities = 111/147 (76%), Gaps = 7/147 (5%)
Strand=Plus/Minus
Query 25916 AAAATGTCTTTAATTGATGTGTGTTATGAACACAT---TAAAGACTCATATTATTATGGT 25972
|| |||||| | | | |||| ||||||||||| || |||| | ||| | ||||||
Sbjct 576974 AACATGTCTCTGAATAATGTATGTTATGAACAAATCGTTAAACA---ATACTGGTATGGT 576918
Query 25973 CTCTTTGGTGATTTTAAATTAGTTATAGATAAAACAACAGGTTGTTTTAATGCTACTAAG 26032
|||||||| ||||| || | |||||||||||| | || || | ||| || || ||||||
Sbjct 576917 CTCTTTGGAGATTTCAAGCTGGTTATAGATAAATCTACTGGATATTTCAACGCCACTAAG 576858
Query 26033 TTATGTAATTTAGGTGGTAAAAAATTT 26059
|||||||| ||||| ||| |||||
Sbjct 576857 TTATGTAAAGATGGTGG-AAAGAATTT 576832
Score = 96.9 bits (106), Expect = 5e-15
Identities = 99/128 (77%), Gaps = 6/128 (5%)
Strand=Plus/Minus
Query 95329 AAAATGTCACTTAATAATATATGTTATGAACACAT---TAAAGACTCATATTATTATGGT 95385
|| ||||| || |||||| ||||||||||||| || |||| | ||| | ||||||
Sbjct 576974 AACATGTCTCTGAATAATGTATGTTATGAACAAATCGTTAAACA---ATACTGGTATGGT 576918
Query 95386 CTATTTGGTGATTTTAAATTAGTTATAGATAAAACTACAGGTTGTTTTAATGCTACTAAA 95445
|| ||||| ||||| || | |||||||||||| |||| || | ||| || || |||||
Sbjct 576917 CTCTTTGGAGATTTCAAGCTGGTTATAGATAAATCTACTGGATATTTCAACGCCACTAAG 576858
Query 95446 TTATGTAA 95453
||||||||
Sbjct 576857 TTATGTAA 576850
Score = 84.2 bits (92), Expect = 3e-11
Identities = 96/128 (75%), Gaps = 6/128 (5%)
Strand=Plus/Minus
Query 96449 AAAATGTCTTTAATTGATGTATGTTATGAACACATC---AAAGACTCATATTATTATGGT 96505
|| |||||| | | | |||||||||||||||| ||| ||| | ||| | ||||||
Sbjct 576974 AACATGTCTCTGAATAATGTATGTTATGAACAAATCGTTAAACA---ATACTGGTATGGT 576918
Query 96506 TTATTTGGTGATTTTAAATTAGTTATAGATAAAACCACAGGTTGTTTTAATGCTACTAAA 96565
| ||||| ||||| || | |||||||||||| | || || | ||| || || |||||
Sbjct 576917 CTCTTTGGAGATTTCAAGCTGGTTATAGATAAATCTACTGGATATTTCAACGCCACTAAG 576858
Query 96566 TTATGTAA 96573
||||||||
Sbjct 576857 TTATGTAA 576850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743295981168640
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